contig_metadata
10 rows where bioproject = "PRJNA896554" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17448754 | 17448754 | PRJNA896554_P_NODE_152594_length_250_cov_0.870056_g145054_i0 | PRJNA896554 | 152594 | 250 | 0.870056 | 2.17514 | Pelobacter propionicus | 29543 | Bacteria | Bacteria | 104 | 6.16e-18 | NTclustered | gi|118501159|gb|CP000482.1| | 338966 | g145054 | i0 | 80.69 | 0.58 | 145 | 18 | 56 | 6 | 80 | 219 | 1952419 | 1952280 | Pelobacter propionicus DSM 2379, complete genome | blastn | 145 | 104 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Pelobacter | Pelobacter propionicus | ||
| 27971635 | 27971635 | PRJNA896554_P_NODE_87905_length_368_cov_1.457627_g80365_i0 | PRJNA896554 | 87905 | 368 | 1.457627 | 5.36406736 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 89.4 | 5.97e-19 | NR | MBK5275779.1 | 2099678 | g80365 | i0 | 42.2 | 0.888586956521739 | 109 | 62 | 88 | 1 | 7 | 330 | 108 | 216 | MBK5275779.1 hypothetical protein [Desulfuromonadales bacterium] | diamond | 327 | 89.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 28453162 | 28453162 | PRJNA896554_P_NODE_63926_length_502_cov_1.435897_g56392_i0 | PRJNA896554 | 63926 | 502 | 1.435897 | 7.20820294 | Desulfatibacillum | 218207 | Bacteria | Bacteria | 112 | 1.92e-25 | NR | WP_015947357.1 | 218208 | g56392 | i0 | 42.1 | 2.91035856573705 | 159 | 80 | 95 | 6 | 7 | 483 | 361 | 507 | WP_015947357.1 thrombospondin type-1 domain-containing protein [Desulfatibacillum aliphaticivorans] | diamond | 1461 | 112 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfatibacillaceae | Desulfatibacillum | Desulfatibacillum aliphaticivorans | ||
| 28800074 | 28800074 | PRJNA896554_P_NODE_110927_length_307_cov_2.594017_g103387_i0 | PRJNA896554 | 110927 | 307 | 2.594017 | 7.96363219 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 52 | 4.15e-5 | NR | WCB48089.1 | 881 | g103387 | i0 | 31.4 | 1.98371335504886 | 102 | 64 | 96.7 | 2 | 303 | 7 | 18 | 116 | WCB48089.1 hypothetical protein PH214_16200 [Nitratidesulfovibrio vulgaris] | diamond | 609 | 52 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Nitratidesulfovibrio | Nitratidesulfovibrio vulgaris | ||
| 28823853 | 28823853 | PRJNA896554_P_NODE_118288_length_294_cov_1.099548_g110748_i0 | PRJNA896554 | 118288 | 294 | 1.099548 | 3.23267112 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 58.2 | 2.58e-7 | NR | MCG8550427.1 | 2044940 | g110748 | i0 | 42.6 | 1.24489795918367 | 61 | 34 | 61.2 | 1 | 9 | 188 | 140 | 200 | MCG8550427.1 molybdopterin-dependent oxidoreductase [Desulfobacterales bacterium] | diamond | 366 | 58.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 30411270 | 30411270 | PRJNA896554_P_NODE_137433_length_266_cov_1.419689_g129893_i0 | PRJNA896554 | 137433 | 266 | 1.419689 | 3.77637274 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 107 | 1.2e-24 | NR | WP_214186582.1 | 40983 | g129893 | i0 | 58 | 31.4436090225564 | 88 | 37 | 99.2 | 0 | 3 | 266 | 578 | 665 | WP_214186582.1 5-histidylcysteine sulfoxide synthase [Geobacter hydrogenophilus] | diamond | 8364 | 108 | 0.990740740740741 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter hydrogenophilus | ||
| 30877144 | 30877144 | PRJNA896554_P_NODE_92654_length_352_cov_1.379928_g85114_i0 | PRJNA896554 | 92654 | 352 | 1.379928 | 4.85734656 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 57.8 | 6.04e-7 | NR | NTV49089.1 | 2282154 | g85114 | i0 | 39.8 | 5.07954545454545 | 88 | 50 | 75 | 1 | 265 | 2 | 114 | 198 | NTV49089.1 OmpA family protein [Geobacteraceae bacterium] | diamond | 1788 | 57.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 31098154 | 31098154 | PRJNA896554_P_NODE_177155_length_234_cov_2.229814_g169615_i0 | PRJNA896554 | 177155 | 234 | 2.229814 | 5.21776476 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 55.8 | 8.15e-7 | NR | MEA2115293.1 | 2202153 | g169615 | i0 | 34.6 | 1.92307692307692 | 78 | 51 | 100 | 0 | 234 | 1 | 373 | 450 | MEA2115293.1 M13 family metallopeptidase [Thermodesulfobacteriota bacterium] | diamond | 450 | 55.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 31137349 | 31137349 | PRJNA896554_P_NODE_99535_length_333_cov_1.680769_g91995_i0 | PRJNA896554 | 99535 | 333 | 1.680769 | 5.59696077 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 184 | 2.39e-51 | NR | MDY0227850.1 | 52560 | g91995 | i0 | 78.9 | 14.7387387387387 | 109 | 23 | 98.2 | 0 | 328 | 2 | 757 | 865 | MDY0227850.1 hypothetical protein [Desulfomicrobium apsheronum] | diamond | 4908 | 184 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Desulfomicrobium | Desulfomicrobium apsheronum | ||
| 31833228 | 31833228 | PRJNA896554_P_NODE_147677_length_253_cov_1.711111_g140137_i0 | PRJNA896554 | 147677 | 253 | 1.711111 | 4.32911083 | PVC group | 1783257 | Bacteria | Bacteria | 107 | 7.67e-25 | NR | MDY0222597.1 | 2067988 | g140137 | i0 | 59.5 | 5.84584980237154 | 84 | 34 | 99.6 | 0 | 2 | 253 | 687 | 770 | MDY0222597.1 hypothetical protein [Desulfobacterium sp.] | diamond | 1479 | 107 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | Desulfobacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;