RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA896554" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896554 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27277043 27277043 PRJNA896554_P_NODE_58663_length_552_cov_1.221294_g51156_i0 PRJNA896554 58663 552 1.221294 6.74154288 Vampirovibrionales bacterium 2692181 Bacteria Bacteria 160 6.9699999999999984e-43   NR MEB3287208.1 2692181 g51156 i0 73.6 1.15217391304348 106 28 57.6 0 1 318 408 513 MEB3287208.1 IMP dehydrogenase [Vampirovibrionales bacterium] diamond 636 160 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales     Vampirovibrionales bacterium
28918688 28918688 PRJNA896554_P_NODE_158208_length_248_cov_0.880000_g150668_i0 PRJNA896554 158208 248 0.88 2.1824 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 150 3.5799999999999993e-43   NR MBY0548714.1 2364082 g150668 i0 100 0.991935483870968 82 0 99.2 0 3 248 95 176 MBY0548714.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 246 150 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29550169 29550169 PRJNA896554_P_NODE_167330_length_244_cov_0.900585_g159790_i0 PRJNA896554 167330 244 0.900585 2.1974274 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 73.9 3.73e-13   NR MBY0550328.1 2364082 g159790 i0 51.9 0.995901639344262 81 39 99.6 0 244 2 174 254 MBY0550328.1 efflux RND transporter periplasmic adaptor subunit [Candidatus Obscuribacterales bacterium] diamond 243 73.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31446134 31446134 PRJNA896554_P_NODE_162296_length_246_cov_0.890173_g154756_i0 PRJNA896554 162296 246 0.890173 2.18982558 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 99.8 3.38e-22   NR MBX9571555.1 2364082 g154756 i0 63 1.97560975609756 81 30 98.8 0 2 244 389 469 MBX9571555.1 enoyl-CoA hydratase/isomerase family protein [Candidatus Obscuribacterales bacterium] diamond 486 99.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31509534 31509534 PRJNA896554_P_NODE_134376_length_270_cov_1.548223_g126836_i0 PRJNA896554 134376 270 1.548223 4.1802021 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 135 1.08e-36   NR MBX9568941.1 2364082 g126836 i0 68.5 2.9 89 28 98.9 0 270 4 79 167 MBX9568941.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Obscuribacterales bacterium] diamond 783 135 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;