RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896554" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA896554 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29834511 29834511 PRJNA896554_P_NODE_137591_length_266_cov_1.196891_g130051_i0 PRJNA896554 137591 266 1.196891 3.18373006 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 117 5.110000000000001e-29   NR HUE38423.1 2838779 g130051 i0 79.2 2.43609022556391 72 15 81.2 0 223 8 8 79 HUE38423.1 DUF6596 domain-containing protein [Candidatus Binatia bacterium] diamond 648 117 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30813896 30813896 PRJNA896554_P_NODE_127174_length_280_cov_1.487923_g119634_i0 PRJNA896554 127174 280 1.487923 4.1661844 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 189 7.309999999999998e-54   NR HZC22190.1 2838779 g119634 i0 96.7 0.985714285714286 92 3 98.6 0 3 278 37 128 HZC22190.1 heavy metal translocating P-type ATPase [Candidatus Binatia bacterium] diamond 276 189 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32300612 32300612 PRJNA896554_P_NODE_117639_length_295_cov_1.310811_g110099_i0 PRJNA896554 117639 295 1.310811 3.86689245 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 48.1 8.25e-4   NR HEY7322682.1 2838779 g110099 i0 42.3 0.528813559322034 52 30 52.9 0 6 161 409 460 HEY7322682.1 MmgE/PrpD family protein [Candidatus Binatia bacterium] diamond 156 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32647584 32647584 PRJNA896554_P_NODE_152660_length_250_cov_0.870056_g145120_i0 PRJNA896554 152660 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 150 7.32e-40   NR HVI07421.1 2838779 g145120 i0 85.4 0.984 82 12 98.4 0 248 3 222 303 HVI07421.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Binatia bacterium] diamond 246 150 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;