RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA896554" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA896554 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5973804 5973804 PRJNA896554_P_NODE_150105_length_251_cov_0.865169_g142565_i0 PRJNA896554 150105 251 0.865169 2.17157419 Desulfurococcales archaeon 2480821 Archaea Archaea 73.6 6.66e-14   NR MCD6324121.1 2480821 g142565 i0 62.3 2.70119521912351 53 20 63.3 0 201 43 62 114 MCD6324121.1 AAA family ATPase [Desulfurococcales archaeon] diamond 678 73.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales     Desulfurococcales archaeon
18720987 18720987 PRJNA896554_P_NODE_110655_length_308_cov_1.310638_g103115_i0 PRJNA896554 110655 308 1.310638 4.03676504 root 1 Root_unresolved Root_unresolved 158 8.1e-45   NR MCW3979328.1 2026714 g103115 i0 76.5 5.96103896103896 102 24 99.4 0 2 307 20 121 MCW3979328.1 amidase [Candidatus Bathyarchaeota archaeon] diamond 1836 159 0.993710691823899 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;