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contig_metadata

23 rows where bioproject = "PRJNA896554", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 23 ✖

tax_kingdom 1

  • Pseudomonadati · 23 ✖

bioproject 1

  • PRJNA896554 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2146011 2146011 PRJNA896554_P_NODE_155762_length_249_cov_0.875000_g148222_i0 PRJNA896554 155762 249 0.875 2.17875 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 151 8.8e-45   NR MCB0370127.1 2053517 g148222 i0 93.5 0.927710843373494 77 5 92.8 0 232 2 31 107 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 231 151 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
3421788 3421788 PRJNA896554_P_NODE_174203_length_241_cov_1.351190_g166663_i0 PRJNA896554 174203 241 1.35119 3.2563679 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 141 1.0999999999999999e-38   NR MEZ4814640.1 3034175 g166663 i0 85 6.70954356846473 80 10 99.6 1 240 1 53 130 MEZ4814640.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Bdellovibrionota bacterium] diamond 1617 141 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
5071780 5071780 PRJNA896554_P_NODE_123324_length_286_cov_1.276995_g115784_i0 PRJNA896554 123324 286 1.276995 3.6522057 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 178 8.62e-50   NR MBX3020485.1 2053517 g115784 i0 98.9 2.95804195804196 94 1 98.6 0 284 3 385 478 MBX3020485.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Bdellovibrionales bacterium] diamond 846 178 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
7249152 7249152 PRJNA896554_P_NODE_173186_length_242_cov_0.911243_g165646_i0 PRJNA896554 173186 242 0.911243 2.20520806 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 141 5.02e-39   NR HEY8280637.1 3034175 g165646 i0 93.8 0.991735537190083 80 5 99.2 0 242 3 119 198 HEY8280637.1 class II fructose-bisphosphatase [Bdellovibrionota bacterium] diamond 240 141 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
11447488 11447488 PRJNA896554_P_NODE_138109_length_265_cov_1.604167_g130569_i0 PRJNA896554 138109 265 1.604167 4.25104255 Halobacteriovorax 1652133 Bacteria Bacteria 156 1.7900000000000002e-33   NTclustered gi|1249980216|gb|CP017414.1| 97084 g130569 i0 78.088 34.9358490566038 251 51 94 4 1 249 2043772 2043524 Halobacteriovorax marinus strain BE01 chromosome, complete genome blastn 9258 156 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax marinus
13625207 13625207 PRJNA896554_P_NODE_43871_length_790_cov_2.152022_g36681_i0 PRJNA896554 43871 790 2.152022 17.0009738 Bdellovibrionales bacterium GWA1_52_35 1797383 Bacteria Bacteria 59.7 3.96e-6   NR OFZ02782.1 1797383 g36681 i0 36.8 0.330379746835443 87 54 33 1 784 524 432 517 OFZ02782.1 MAG: hypothetical protein A2X97_04205 [Bdellovibrionales bacterium GWA1_52_35] diamond 261 59.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium GWA1_52_35
16175007 16175007 PRJNA896554_P_NODE_79633_length_402_cov_1.124620_g72093_i0 PRJNA896554 79633 402 1.12462 4.5209724 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 203 2.13e-60   NR MCB0370360.1 2053517 g72093 i0 79.1 1 134 25 97.8 1 395 3 276 409 MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 402 203 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
23824511 23824511 PRJNA896554_P_NODE_82199_length_390_cov_2.441640_g74659_i0 PRJNA896554 82199 390 2.44164 9.522396 Oligoflexus sp. 1971216 Bacteria Bacteria 88.2 5.04e-19   NR WP_324954760.1 1971216 g74659 i0 40.2 1.01538461538462 132 38 99.2 4 4 390 16 109 WP_324954760.1 hypothetical protein [Oligoflexus sp.] diamond 396 88.2 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
26707165 26707165 PRJNA896554_P_NODE_152201_length_250_cov_1.214689_g144661_i0 PRJNA896554 152201 250 1.214689 3.0367225 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 141 4.39e-38   NR MCB0368368.1 2053517 g144661 i0 86.7 0.996 83 9 99.6 1 1 249 277 357 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 249 141 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27940167 27940167 PRJNA896554_P_NODE_133845_length_271_cov_1.166667_g126305_i0 PRJNA896554 133845 271 1.166667 3.16166757 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 130 3.04e-35   NR MBX9767866.1 2053517 g126305 i0 71.9 0.985239852398524 89 24 97.4 1 269 6 3 91 MBX9767866.1 GTP-binding protein [Bdellovibrionales bacterium] diamond 267 130 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29076899 29076899 PRJNA896554_P_NODE_137328_length_266_cov_1.595855_g129788_i0 PRJNA896554 137328 266 1.595855 4.2449743 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 162 9.13e-49   NR MBP9675022.1 2081706 g129788 i0 88.5 0.981203007518797 87 10 98.1 0 3 263 40 126 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 261 162 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29203244 29203244 PRJNA896554_P_NODE_72549_length_439_cov_3.021858_g65009_i0 PRJNA896554 72549 439 3.021858 13.26595662 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 46.6 0.0135   NR MCB0348069.1 2053517 g65009 i0 47.6 0.430523917995444 63 22 40.3 2 260 436 397 452 MCB0348069.1 PKD domain-containing protein [Bdellovibrionales bacterium] diamond 189 46.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30181937 30181937 PRJNA896554_P_NODE_133952_length_271_cov_1.126263_g126412_i0 PRJNA896554 133952 271 1.126263 3.05217273 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 93.6 1.67e-21   NR MCB0368409.1 2053517 g126412 i0 46.2 1.00738007380074 91 48 99.6 1 1 270 53 143 MCB0368409.1 hypothetical protein [Bdellovibrionales bacterium] diamond 273 93.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30189699 30189699 PRJNA896554_P_NODE_157432_length_248_cov_0.880000_g149892_i0 PRJNA896554 157432 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 80.5 1.97e-15   NR PZO79293.1 349221 g149892 i0 47.4 1.86290322580645 78 35 89.5 2 1 222 361 436 PZO79293.1 MAG: hypothetical protein DI626_11630 [Micavibrio aeruginosavorus] diamond 462 80.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30213470 30213470 PRJNA896554_P_NODE_147332_length_254_cov_1.104972_g139792_i0 PRJNA896554 147332 254 1.104972 2.80662888 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 122 2.56e-34   NR MCB0370849.1 2053517 g139792 i0 90 0.826771653543307 70 7 82.7 0 39 248 1 70 MCB0370849.1 protein kinase [Bdellovibrionales bacterium] diamond 210 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30498030 30498030 PRJNA896554_P_NODE_150833_length_251_cov_0.865169_g143293_i0 PRJNA896554 150833 251 0.865169 2.17157419 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 150 7.48e-41   NR PZQ46742.1 349221 g143293 i0 87.7 1.94820717131474 81 10 96.8 0 250 8 149 229 PZQ46742.1 MAG: hypothetical protein DI551_04635 [Micavibrio aeruginosavorus] diamond 489 150 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30845597 30845597 PRJNA896554_P_NODE_164834_length_245_cov_0.895349_g157294_i0 PRJNA896554 164834 245 0.895349 2.19360505 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 95.1 7.789999999999999e-23   NR MES2744750.1 3034175 g157294 i0 62 0.96734693877551 79 30 96.7 0 9 245 36 114 MES2744750.1 DoxX protein [Bdellovibrionota bacterium] diamond 237 95.1 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31161126 31161126 PRJNA896554_P_NODE_126075_length_282_cov_1.105263_g118535_i0 PRJNA896554 126075 282 1.105263 3.11684166 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 100 1.76e-25   NR MCB0369353.1 2053517 g118535 i0 60.5 0.861702127659574 81 30 85.1 2 3 242 1 80 MCB0369353.1 hypothetical protein [Bdellovibrionales bacterium] diamond 243 100 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31572812 31572812 PRJNA896554_P_NODE_155436_length_249_cov_0.875000_g147896_i0 PRJNA896554 155436 249 0.875 2.17875 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 89.7 1.21e-18   NR HEY8280183.1 3034175 g147896 i0 54.2 1 83 38 100 0 249 1 282 364 HEY8280183.1 transcription-repair coupling factor [Bdellovibrionota bacterium] diamond 249 89.7 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31857208 31857208 PRJNA896554_P_NODE_152417_length_250_cov_0.870056_g144877_i0 PRJNA896554 152417 250 0.870056 2.17514 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 120 3.05e-33   NR MCB0368989.1 2053517 g144877 i0 69.5 0.984 82 25 98.4 0 248 3 1 82 MCB0368989.1 hypothetical protein [Bdellovibrionales bacterium] diamond 246 120 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32015488 32015488 PRJNA896554_P_NODE_170538_length_243_cov_0.905882_g162998_i0 PRJNA896554 170538 243 0.905882 2.20129326 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 100 3.5199999999999996e-24   NR HUP58353.1 3034175 g162998 i0 56.8 1 81 35 100 0 1 243 123 203 HUP58353.1 DUF2071 domain-containing protein [Bdellovibrionota bacterium] diamond 243 100 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
32616448 32616448 PRJNA896554_P_NODE_150340_length_251_cov_0.865169_g142800_i0 PRJNA896554 150340 251 0.865169 2.17157419 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 144 1.51e-39   NR MBA2404471.1 2053517 g142800 i0 80.7 0.99203187250996006 83 16 99.2 0 1 249 36 118 MBA2404471.1 thioredoxin domain-containing protein [Bdellovibrionales bacterium] diamond 249 144 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32710805 32710805 PRJNA896554_P_NODE_123980_length_285_cov_1.396226_g116440_i0 PRJNA896554 123980 285 1.396226 3.9792441 Oligoflexia bacterium 2599941 Bacteria Bacteria 48.9 4.18e-4   NR MCO5141485.1 2599941 g116440 i0 27.9 0.905263157894737 86 60 88.4 1 253 2 809 894 MCO5141485.1 hypothetical protein [Oligoflexia bacterium] diamond 258 48.9 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;