RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA896554" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA896554 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3421246 3421246 PRJNA896554_P_NODE_151443_length_250_cov_3.180791_g143903_i0 PRJNA896554 151443 250 3.180791 7.9519775 Respirovirus muris 3052731 Viruses Viruses 436 5.349999999999999e-118   NTclustered gi|152002452|dbj|AB275416.1| 3052731 g143903 i0 99.177 49.524 243 1 97 1 9 250 3971 3729 Respirovirus muris genomic RNA, complete genome, strain: Cl. 151 blastn 12381 436 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus muris
3422113 3422113 PRJNA896554_P_NODE_343_length_7208_cov_32.789488_g264_i0 PRJNA896554 343 7208 32.789488 2363.46629504 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2471 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g264 i0 91.699 0.649833518312986 1783 143 65 5 8 1788 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4684 2471 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
7247621 7247621 PRJNA896554_P_NODE_107766_length_314_cov_0.958506_g100226_i0 PRJNA896554 107766 314 0.958506 3.00970884 Potexvirus ecspotati 3433837 Viruses Viruses 569 6.559999999999998e-158   NTclustered gi|301171118|dbj|AB196001.1| 12183 g100226 i0 99.363 99.9140127388535 314 2 100 0 1 314 3926 3613 Potato virus X genomic RNA, complete genome, strain: TO blastn 31373 569 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
7249626 7249626 PRJNA896554_P_NODE_42906_length_814_cov_1.217274_g35756_i0 PRJNA896554 42906 814 1.217274 9.90861036 Potexvirus ecspotati 3433837 Viruses Viruses 1432 0   NTclustered gi|2025365930|gb|MT752834.1| 12183 g35756 i0 98.403 99.9963144963145 814 13 100 0 1 814 2662 1849 Potato virus X isolate Jin119, complete genome blastn 81397 1432 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
7250137 7250137 PRJNA896554_P_NODE_68306_length_467_cov_2.096447_g60766_i0 PRJNA896554 68306 467 2.096447 9.79040749 Potexvirus ecspotati 3433837 Viruses Viruses 841 0   NTclustered gi|1620027|dbj|D87962.1| 12183 g60766 i0 99.143 100.267665952891 467 4 100 0 1 467 150 616 Potato virus X mRNA for 12kDa nonstructural protein, 8kDa nonstructural protein, coat protein, complete cds blastn 46825 841 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
12723196 12723196 PRJNA896554_P_NODE_111090_length_307_cov_1.594017_g103550_i0 PRJNA896554 111090 307 1.594017 4.89363219 Tobamovirus 12234 Viruses Viruses 568 2.3e-157   NTclustered gi|1540839158|gb|MK133093.1| 1761477 g103550 i0 100 100 307 0 100 0 1 307 336 30 Tomato brown rugose fruit virus isolate TBRFV-P12-3G, complete genome blastn 30700 568 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
14899847 14899847 PRJNA896554_P_NODE_63892_length_502_cov_1.939394_g56358_i0 PRJNA896554 63892 502 1.939394 9.73575788 Potexvirus ecspotati 3433837 Viruses Viruses 883 0   NTclustered gi|1315193312|gb|MF682527.1| 12183 g56358 i0 98.406 100.962151394422 502 8 100 0 1 502 5480 5981 Potato virus X isolate PVX_Tn147, complete genome blastn 50683 883 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
16172343 16172343 PRJNA896554_P_NODE_114193_length_301_cov_1.631579_g106653_i0 PRJNA896554 114193 301 1.631579 4.91105279 Potexvirus ecspotati 3433837 Viruses Viruses 540 4.899999999999999e-149   NTclustered gi|2025365930|gb|MT752834.1| 12183 g106653 i0 99.003 99.9601328903654 301 3 100 0 1 301 4595 4895 Potato virus X isolate Jin119, complete genome blastn 30088 540 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati
21273947 21273947 PRJNA896554_P_NODE_69397_length_460_cov_1.643411_g61857_i0 PRJNA896554 69397 460 1.643411 7.5596906 Potexvirus ecspotati 3433837 Viruses Viruses 815 0   NTclustered gi|2025365630|gb|MT752784.1| 12183 g61857 i0 98.693 99.8739130434783 459 6 99 0 2 460 3551 3093 Potato virus X isolate Ica098-2, complete genome blastn 45942 815 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspotati

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;