RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896554", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA896554 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4697981 4697981 PRJNA896554_P_NODE_108864_length_311_cov_2.571429_g101324_i0 PRJNA896554 108864 311 2.571429 7.99714419 Mitosporidium daphniae 1485682 Fungi Fungi 140 4.71e-38   NR XP_013236520.1 1485682 g101324 i0 69 0.964630225080386 100 29 94.5 1 16 309 154 253 XP_013236520.1 60S ribosomal protein L5-2 [Mitosporidium daphniae] diamond 300 140 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
30372016 30372016 PRJNA896554_P_NODE_151032_length_251_cov_0.865169_g143492_i0 PRJNA896554 151032 251 0.865169 2.17157419 Trachipleistophora hominis 72359 Fungi Fungi 97.4 1.1e-22   NR ELQ76414.1 72359 g143492 i0 59 1.9840637450199201 83 34 99.2 0 251 3 111 193 ELQ76414.1 hypothetical protein THOM_0601, partial [Trachipleistophora hominis] diamond 498 97.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Trachipleistophora Trachipleistophora hominis
31351329 31351329 PRJNA896554_P_NODE_156656_length_248_cov_1.651429_g149116_i0 PRJNA896554 156656 248 1.651429 4.09554392 Nosema granulosis 83296 Fungi Fungi 72 1.74e-13   NR KAF9764285.1 83296 g149116 i0 55.9 0.713709677419355 59 22 70.2 2 183 10 105 160 KAF9764285.1 FAD-linked sulfhydryl oxidase ERV1 [Nosema granulosis] diamond 177 72 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
31706882 31706882 PRJNA896554_P_NODE_167177_length_244_cov_0.900585_g159637_i0 PRJNA896554 167177 244 0.900585 2.1974274 Pleistophoridae 35232 Fungi Fungi 109 1.26e-26   NR ELQ74331.1 72359 g159637 i0 54.3 1.99180327868852 81 37 99.6 0 1 243 210 290 ELQ74331.1 ethanolamine kinase [Trachipleistophora hominis] diamond 486 109 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Trachipleistophora Trachipleistophora hominis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;