RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA896554", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA896554 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5974601 5974601 PRJNA896554_P_NODE_29185_length_1281_cov_15.953642_g23536_i0 PRJNA896554 29185 1281 15.953642 204.36615402 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 287 1.3e-91   NR PJF16902.1 1246581 g23536 i0 64.4 5.77751756440281 236 81 55 3 1112 408 24 257 PJF16902.1 hypothetical protein PSACC_03283 [Paramicrosporidium saccamoebae] diamond 7401 287 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
25470595 25470595 PRJNA896554_P_NODE_96380_length_341_cov_2.123134_g88840_i0 PRJNA896554 96380 341 2.123134 7.23988694 Eukaryota 2759 Fungi Fungi 159 6.57e-44   NR EPZ30990.1 988480 g88840 i0 71.4 6.89736070381232 112 32 98.5 0 338 3 366 477 EPZ30990.1 Acyl-CoA dehydrogenase/oxidase domain-containing protein [Rozella allomycis CSF55] diamond 2352 160 0.99375 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;