RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA896554" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA896554 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27568837 27568837 PRJNA896554_P_NODE_166864_length_244_cov_0.900585_g159324_i0 PRJNA896554 166864 244 0.900585 2.1974274 Viruses 10239 Viruses Viruses 84.7 3.47e-17   NR DAC81401.1 2609864 g159324 i0 57.1 3.77459016393443 77 33 94.7 0 2 232 15 91 DAC81401.1 TPA_asm: integrase [Pimephales minnow adintovirus] diamond 921 84.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
28950678 28950678 PRJNA896554_P_NODE_61088_length_527_cov_2.425110_g53561_i0 PRJNA896554 61088 527 2.42511 12.7803297 Lake Baikal virophage 8 3086131 Viruses Viruses 53.5 1.02e-4   NR WPF46657.1 3086131 g53561 i0 43.8 0.455407969639469 80 37 43.3 3 110 337 323 398 WPF46657.1 MAG: hypothetical protein [Lake Baikal virophage 8] diamond 240 53.5 1 Viruses   Bamfordvirae Preplasmiviricota Virophaviricetes Priklausovirales Lavidaviridae   Lake Baikal virophage 8
29866116 29866116 PRJNA896554_P_NODE_152891_length_250_cov_0.870056_g145351_i0 PRJNA896554 152891 250 0.870056 2.17514 Astyanax tetra cavefish adintovirus 2609866 Viruses Viruses 122 3.74e-32   NR DBA49780.1 2609866 g145351 i0 61.7 0.972 81 31 97.2 0 250 8 157 237 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 243 122 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Astyanax tetra cavefish adintovirus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;