RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA896554", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA896554 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26802385 26802385 PRJNA896554_P_NODE_145121_length_256_cov_1.683060_g137581_i0 PRJNA896554 145121 256 1.68306 4.3086336 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 45.1 0.00628   NR MBP7214915.1 2447898 g137581 i0 45.2 1.18359375 62 24 72.7 2 69 254 2 53 MBP7214915.1 S-methyl-5-thioribose-1-phosphate isomerase [Candidatus Kapaibacterium sp.] diamond 303 45.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28540220 28540220 PRJNA896554_P_NODE_136827_length_267_cov_1.190722_g129287_i0 PRJNA896554 136827 267 1.190722 3.17922774 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 107 9.65e-26   NR MCU0426694.1 2447898 g129287 i0 60.2 3.12359550561798 88 34 98.9 1 2 265 37 123 MCU0426694.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 834 107 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;