RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA896554", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA896554 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27403449 27403449 PRJNA896554_P_NODE_72983_length_437_cov_1.271978_g65443_i0 PRJNA896554 72983 437 1.271978 5.55854386 Minisyncoccota bacterium 2053589 Bacteria Bacteria 124 2.34e-30   NR MDR3570663.1 2053589 g65443 i0 50.4 0.940503432494279 137 59 94.1 3 1 411 309 436 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 411 124 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29203229 29203229 PRJNA896554_P_NODE_160289_length_247_cov_0.885057_g152749_i0 PRJNA896554 160289 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 148 2.57e-41   NR MBP6948808.1 2053589 g152749 i0 95.1 0.983805668016194 81 4 98.4 0 3 245 256 336 MBP6948808.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 243 148 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29866108 29866108 PRJNA896554_P_NODE_131911_length_273_cov_2.310000_g124371_i0 PRJNA896554 131911 273 2.31 6.3063 Minisyncoccota bacterium 2053589 Bacteria Bacteria 154 2.1399999999999993e-43   NR HVX91236.1 2053589 g124371 i0 86.5 0.978021978021978 89 12 97.8 0 272 6 100 188 HVX91236.1 IS3 family transposase [Candidatus Paceibacterota bacterium] diamond 267 154 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;