RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896554", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA896554 · 4 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22548088 22548088 PRJNA896554_P_NODE_28418_length_1317_cov_30.315916_g22882_i0 PRJNA896554 28418 1317 30.315916 399.26061372 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 401 7.37e-135   NR XP_013760592.1 461836 g22882 i0 67.9 0.681093394077449 299 92 67.7 2 1234 344 43 339 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 897 401 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29297813 29297813 PRJNA896554_P_NODE_78629_length_406_cov_2.135135_g71089_i0 PRJNA896554 78629 406 2.135135 8.6686481 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 102 4.0900000000000002e-22   NR XP_013754710.1 461836 g71089 i0 42.6 0.849753694581281 115 60 83.5 4 19 357 552 662 XP_013754710.1 uncharacterized protein AMSG_09324 [Thecamonas trahens ATCC 50062] diamond 345 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29455247 29455247 PRJNA896554_P_NODE_163030_length_246_cov_0.890173_g155490_i0 PRJNA896554 163030 246 0.890173 2.18982558 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 78.6 9.02e-15   NR XP_013761115.1 461836 g155490 i0 51.9 0.98780487804878 81 38 98.8 1 244 2 362 441 XP_013761115.1 major facilitator superfamily transporter domain-containing protein 1 [Thecamonas trahens ATCC 50062] diamond 243 78.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32836749 32836749 PRJNA896554_P_NODE_107180_length_315_cov_1.272727_g99640_i0 PRJNA896554 107180 315 1.272727 4.00909005 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 110 3e-26   NR XP_013759935.1 461836 g99640 i0 49.5 0.980952380952381 103 52 98.1 0 5 313 234 336 XP_013759935.1 phosphatidylserine synthase [Thecamonas trahens ATCC 50062] diamond 309 110 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;