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contig_metadata

12 rows where bioproject = "PRJNA893346", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 12 ✖

tax_phylum 1

  • Myxococcota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA893346 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13621713 13621713 PRJNA893346_P_NODE_19271_length_351_cov_1.661871_g18782_i0 PRJNA893346 19271 351 1.661871 5.83316721 Polyangiales bacterium 3034171 Bacteria Bacteria 168 4.87e-49   NR MFO0692503.1 3034171 g18782 i0 75.7 4.76923076923077 111 26 94.9 1 341 9 115 224 MFO0692503.1 class I fructose-bisphosphate aldolase [Polyangiales bacterium] diamond 1674 168 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
17446640 17446640 PRJNA893346_P_NODE_36994_length_245_cov_1.203488_g36504_i0 PRJNA893346 36994 245 1.203488 2.9485456 root 1 Root_unresolved Root_unresolved 106 1.24e-24   NR WP_236514608.1 927083 g36504 i0 65.3 6.19591836734694 72 25 88.2 0 241 26 93 164 WP_236514608.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Sandaracinus amylolyticus] diamond 1518 106 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus amylolyticus
27435070 27435070 PRJNA893346_P_NODE_13603_length_423_cov_1.894286_g13117_i0 PRJNA893346 13603 423 1.894286 8.01282978 Pyxidicoccus fallax 394095 Bacteria Bacteria 46.6 0.0118   NR AIT55263.1 394095 g13117 i0 43.1 0.51063829787234 72 39 49.6 2 332 123 1611 1682 AIT55263.1 GulF [Pyxidicoccus fallax] diamond 216 46.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Pyxidicoccus Pyxidicoccus fallax
27695496 27695496 PRJNA893346_P_NODE_16844_length_378_cov_0.908197_g16356_i0 PRJNA893346 16844 378 0.908197 3.43298466 root 1 Root_unresolved Root_unresolved 74.7 1.09e-12   NR WP_324949294.1 1872627 g16356 i0 37.1 6.11904761904762 140 59 90.5 6 365 24 465 601 WP_324949294.1 RTX toxin [Archangium sp.] diamond 2313 74.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
28129566 28129566 PRJNA893346_P_NODE_25425_length_301_cov_1.350877_g24935_i0 PRJNA893346 25425 301 1.350877 4.06613977 Chondromyces crocatus 52 Bacteria Bacteria 49.3 3.36e-4   NR WP_082362723.1 52 g24935 i0 34.6 2.33222591362126 78 43 72.8 2 228 10 210 284 WP_082362723.1 C-type lectin domain-containing protein [Chondromyces crocatus] diamond 702 49.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
28255645 28255645 PRJNA893346_P_NODE_29126_length_277_cov_1.348039_g28636_i0 PRJNA893346 29126 277 1.348039 3.73406803 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 87.4 1.41e-19   NR MBI4510343.1 2026735 g28636 i0 43.8 1.71119133574007 80 45 86.6 0 34 273 1 80 MBI4510343.1 SRPBCC family protein [Deltaproteobacteria bacterium] diamond 474 87.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29771157 29771157 PRJNA893346_P_NODE_22271_length_325_cov_1.515873_g21782_i0 PRJNA893346 22271 325 1.515873 4.92658725 Sorangium cellulosum 56 Bacteria Bacteria 66.2 4.28e-11   NR KYF56378.1 56 g21782 i0 43.9 0.756923076923077 82 45 74.8 1 8 250 57 138 KYF56378.1 hypothetical protein BE08_41265 [Sorangium cellulosum] diamond 246 66.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
30118674 30118674 PRJNA893346_P_NODE_4932_length_731_cov_1.326748_g4485_i0 PRJNA893346 4932 731 1.326748 9.69852788 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 65.5 3.11e-8   NR MBI3782678.1 2026735 g4485 i0 30.6 0.792065663474692 193 99 71.8 4 592 68 52 227 MBI3782678.1 trypsin-like serine protease [Deltaproteobacteria bacterium] diamond 579 65.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30853253 30853253 PRJNA893346_P_NODE_36034_length_247_cov_0.885057_g35544_i0 PRJNA893346 36034 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 101 8.719999999999999e-23   NR HVJ94932.1 1971228 g35544 i0 54.3 2.92712550607287 81 37 98.4 0 3 245 182 262 HVJ94932.1 FAD-binding oxidoreductase [Labilithrix sp.] diamond 723 101 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
32142084 32142084 PRJNA893346_P_NODE_38518_length_243_cov_0.905882_g38028_i0 PRJNA893346 38518 243 0.905882 2.20129326 Myxococcales bacterium 2026763 Bacteria Bacteria 59.3 5.06e-8   NR MCA9523410.1 2026763 g38028 i0 38.7 0.925925925925926 75 42 88.9 2 243 28 61 134 MCA9523410.1 glutathione S-transferase family protein [Myxococcales bacterium] diamond 225 59.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32585099 32585099 PRJNA893346_P_NODE_19759_length_347_cov_1.072993_g19270_i0 PRJNA893346 19759 347 1.072993 3.72328571 Polyangiaceae bacterium 2268199 Bacteria Bacteria 90.9 4.08e-19   NR HYJ08966.1 2268199 g19270 i0 60.9 0.596541786743516 69 26 58.8 1 214 11 75 143 HYJ08966.1 Kazal-type serine protease inhibitor family protein [Polyangiaceae bacterium] diamond 207 90.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32647545 32647545 PRJNA893346_P_NODE_36500_length_246_cov_0.890173_g36010_i0 PRJNA893346 36500 246 0.890173 2.18982558 Polyangiaceae bacterium 2268199 Bacteria Bacteria 44.7 0.00138   NR HMR09041.1 2268199 g36010 i0 35.6 3.29268292682927 73 41 81.7 3 40 240 5 77 HMR09041.1 protein kinase [Polyangiaceae bacterium] diamond 810 44.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;