RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA893346", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA893346 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13622156 13622156 PRJNA893346_P_NODE_36771_length_246_cov_0.890173_g36281_i0 PRJNA893346 36771 246 0.890173 2.18982558 Eukaryota 2759 Fungi Fungi 115 3.12e-28   NR KAI9183058.1 1313167 g36281 i0 85.7 5.02439024390244 63 9 76.8 0 192 4 3 65 KAI9183058.1 centromere/microtubule-binding protein cbf5 [Blastocladiella emersonii ATCC 22665] diamond 1236 116 0.991379310344828 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
14896561 14896561 PRJNA893346_P_NODE_6272_length_644_cov_1.486865_g5806_i0 PRJNA893346 6272 644 1.486865 9.5754106 Fungi 4751 Fungi Fungi 344 1.5699999999999996e-116   NR KAI9218401.1 64508 g5806 i0 79.2 30.167701863354 216 43 99.7 2 2 643 57 272 KAI9218401.1 60S ribosomal protein L2 [Blastocladiella britannica] diamond 19428 344 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27245231 27245231 PRJNA893346_P_NODE_40023_length_241_cov_0.916667_g39533_i0 PRJNA893346 40023 241 0.916667 2.20916747 Paraphysoderma sedebokerense 1500003 Fungi Fungi 79.3 4.77e-15   NR KAI9139907.1 1500003 g39533 i0 64.4 0.734439834024896 59 21 73.4 0 61 237 643 701 KAI9139907.1 FAD binding domain-containing protein, partial [Paraphysoderma sedebokerense] diamond 177 79.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29171549 29171549 PRJNA893346_P_NODE_21369_length_333_cov_1.184615_g20880_i0 PRJNA893346 21369 333 1.184615 3.94476795 Coelomomyces lativittatus 945690 Fungi Fungi 60.8 1.08e-8   NR KAJ1507245.1 945690 g20880 i0 36.4 0.963963963963964 107 56 85.6 3 286 2 29 135 KAJ1507245.1 hypothetical protein HMI56_000196 [Coelomomyces lativittatus] diamond 321 60.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
29897760 29897760 PRJNA893346_P_NODE_39031_length_242_cov_0.911243_g38541_i0 PRJNA893346 39031 242 0.911243 2.20520806 Paraphysoderma sedebokerense 1500003 Fungi Fungi 70.5 4.64e-12   NR KAI9145740.1 1500003 g38541 i0 57.1 1.64876033057851 56 24 69.4 0 205 38 21 76 KAI9145740.1 maintenance of mitochondrial structure and function-domain-containing protein [Paraphysoderma sedebokerense] diamond 399 70.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30758523 30758523 PRJNA893346_P_NODE_27534_length_287_cov_1.126168_g27044_i0 PRJNA893346 27534 287 1.126168 3.23210216 Blastocladiaceae 4806 Fungi Fungi 130 5.47e-35   NR KAJ3375744.1 64504 g27044 i0 64.2 7.81881533101045 95 34 99.3 0 3 287 162 256 KAJ3375744.1 40S ribosomal protein [Allomyces arbusculus] diamond 2244 130 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
31857161 31857161 PRJNA893346_P_NODE_37717_length_244_cov_0.900585_g37227_i0 PRJNA893346 37717 244 0.900585 2.1974274 Catenaria anguillulae PL171 765915 Fungi Fungi 60.8 1.47e-8   NR ORZ40782.1 765915 g37227 i0 46.1 1.86885245901639 76 28 92.2 2 230 6 132 195 ORZ40782.1 hypothetical protein BCR44DRAFT_52752 [Catenaria anguillulae PL171] diamond 456 60.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
31952098 31952098 PRJNA893346_P_NODE_39277_length_242_cov_0.911243_g38787_i0 PRJNA893346 39277 242 0.911243 2.20520806 Blastocladiella britannica 64508 Fungi Fungi 42.7 0.035   NR KAI9219837.1 64508 g38787 i0 44.9 0.607438016528926 49 27 60.7 0 147 1 38 86 KAI9219837.1 hypothetical protein BC828DRAFT_385086 [Blastocladiella britannica] diamond 147 42.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;