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contig_metadata

34 rows where bioproject = "PRJNA893346", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 34 ✖

tax_clade 1

  • Sar · 34 ✖

bioproject 1

  • PRJNA893346 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
868335 868335 PRJNA893346_P_NODE_30901_length_266_cov_1.155440_g30411_i0 PRJNA893346 30901 266 1.15544 3.0734704 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 111 2.9e-26   NR RHY08398.1 112090 g30411 i0 77.2 3.6203007518797 79 18 89.1 0 255 19 6 84 RHY08398.1 hypothetical protein DYB25_006691, partial [Aphanomyces astaci] diamond 963 111 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
3795135 3795135 PRJNA893346_P_NODE_17943_length_365_cov_1.729452_g17454_i0 PRJNA893346 17943 365 1.729452 6.3124998 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 267 1.14e-66   NTclustered gi|813139567|ref|XM_012343453.1| 695850 g17454 i0 80.165 96.1013698630137 363 66 99 6 4 363 1594 1235 Saprolegnia parasitica CBS 223.65 hsp70-like protein mRNA blastn 35077 267 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
4696532 4696532 PRJNA893346_P_NODE_22224_length_326_cov_0.893281_g21735_i0 PRJNA893346 22224 326 0.893281 2.91209606 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 143 1.5e-38   NR OQS05451.1 74557 g21735 i0 60.6 16.4171779141104 104 41 95.7 0 6 317 18 121 OQS05451.1 disulfide-isomerase [Thraustotheca clavata] diamond 5352 143 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
4697005 4697005 PRJNA893346_P_NODE_5684_length_678_cov_1.700826_g5220_i0 PRJNA893346 5684 678 1.700826 11.53160028 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 318 3.66e-105   NR TMW60420.1 41045 g5220 i0 69.8 46.9070796460177 225 68 99.6 0 676 2 1 225 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 31803 320 0.99375 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
7246467 7246467 PRJNA893346_P_NODE_32806_length_253_cov_2.844444_g32316_i0 PRJNA893346 32806 253 2.844444 7.19644332 Achlya bisexualis 4766 SAR_Eukaryotes SAR_Eukaryotes 246 9.81e-61   NTclustered gi|2289|emb|X59936.1| 4766 g32316 i0 85.185 87.5375494071146 243 33 95 3 1 240 243 1 A.bisexualis gene for actin blastn 22147 246 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya bisexualis
9796527 9796527 PRJNA893346_P_NODE_8288_length_552_cov_1.411273_g7807_i0 PRJNA893346 8288 552 1.411273 7.79022696 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 348 6.19e-91   NTclustered gi|2795023784|ref|XM_067929914.1| 4785 g7807 i0 79.331 78.286231884058 508 95 91 9 45 547 1538 1036 Phytophthora cinnamomi hsp70-like protein (IUM83_05758), partial mRNA blastn 43214 348 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
10171795 10171795 PRJNA893346_P_NODE_11928_length_454_cov_1.283465_g11443_i0 PRJNA893346 11928 454 1.283465 5.8269311 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 148 2.05e-41   NR TYZ63780.1 1485010 g11443 i0 52.3 9.67400881057269 151 63 99.8 2 2 454 67 208 TYZ63780.1 hypothetical protein PybrP1_001840 [[Pythium] brassicae (nom. inval.)] diamond 4392 148 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
11071460 11071460 PRJNA893346_P_NODE_15589_length_394_cov_0.716511_g15101_i0 PRJNA893346 15589 394 0.716511 2.82305334 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 267 1.2399999999999998e-66   NTclustered gi|813138586|ref|XM_012343406.1| 695850 g15101 i0 80.58 36.2918781725888 345 67 88 0 30 374 575 231 Saprolegnia parasitica CBS 223.65 tubulin alpha chain mRNA blastn 14299 267 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
11071539 11071539 PRJNA893346_P_NODE_18689_length_357_cov_2.169014_g18200_i0 PRJNA893346 18689 357 2.169014 7.74337998 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 159 1.26e-47   NR OQR99210.1 1202772 g18200 i0 70.9 1.79831932773109 110 31 92.4 1 339 10 8 116 OQR99210.1 60S ribosomal protein L22 [Achlya hypogyna] diamond 642 159 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
12347176 12347176 PRJNA893346_P_NODE_24550_length_307_cov_2.132479_g24060_i0 PRJNA893346 24550 307 2.132479 6.54671053 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 190 9.36e-59   NR RHX98558.1 112090 g24060 i0 90.2 3.98697068403909 102 9 98.7 1 3 305 79 180 RHX98558.1 hypothetical protein DYB36_009174, partial [Aphanomyces astaci] diamond 1224 190 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
13997173 13997173 PRJNA893346_P_NODE_38731_length_243_cov_0.858824_g38241_i0 PRJNA893346 38731 243 0.858824 2.08694232 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 174 4.48e-39   NTclustered gi|325181694|emb|FR824064.1| 890382 g38241 i0 82.266 25.7530864197531 203 34 83 2 1 202 12505 12706 Albugo laibachii Nc14, genomic contig CONTIG_19_NC14_v4_197315_238 blastn 6258 174 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
18719249 18719249 PRJNA893346_P_NODE_11375_length_465_cov_1.571429_g10890_i0 PRJNA893346 11375 465 1.571429 7.30714485 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 207 1.41e-65   NR GLD99505.1 114742 g10890 i0 68.5 5.55483870967742 143 44 92.3 1 8 436 16 157 GLD99505.1 hypothetical protein PINS_up008231 [Pythium insidiosum] diamond 2583 209 0.990430622009569 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
19994469 19994469 PRJNA893346_P_NODE_13056_length_432_cov_1.278552_g12570_i0 PRJNA893346 13056 432 1.278552 5.52334464 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 139 3.869999999999999e-37   NR DBA03690.1 4803 g12570 i0 59.3 0.854166666666667 123 47 85.4 1 47 415 220 339 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 369 139 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
19994484 19994484 PRJNA893346_P_NODE_13576_length_424_cov_1.068376_g13090_i0 PRJNA893346 13576 424 1.068376 4.52991424 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 283 1.33e-71   NTclustered gi|166043006|emb|CU355697.1| 100861 g13090 i0 82.335 55.811320754717 334 51 78 6 2 331 364 693 Aphanomyces euteiches cDNA blastn 23664 283 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
21269781 21269781 PRJNA893346_P_NODE_15157_length_399_cov_3.984663_g14669_i0 PRJNA893346 15157 399 3.984663 15.89880537 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 303 9.56e-78   NTclustered gi|673041888|ref|XM_008876683.1| 157072 g14669 i0 80.556 97.5714285714286 396 75 99 2 2 396 329 723 Aphanomyces invadans elongation factor 1-alpha mRNA blastn 38931 303 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
24194756 24194756 PRJNA893346_P_NODE_15639_length_393_cov_0.962500_g15151_i0 PRJNA893346 15639 393 0.9625 3.782625 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 379 1.52e-100   NTclustered gi|2795048880|ref|XM_067943659.1| 4785 g15151 i0 84.675 66.6488549618321 385 53 97 6 1 382 402 21 Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA blastn 26193 379 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
25093942 25093942 PRJNA893346_P_NODE_16280_length_384_cov_1.794212_g15792_i0 PRJNA893346 16280 384 1.794212 6.88977408 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 77 2.42e-15   NR DBA03679.1 4803 g15792 i0 61.3 3.53125 62 24 48.4 0 343 158 1 62 DBA03679.1 TPA: hypothetical protein N0F65_004096 [Lagenidium giganteum] diamond 1356 77 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
27094969 27094969 PRJNA893346_P_NODE_37822_length_244_cov_0.900585_g37332_i0 PRJNA893346 37822 244 0.900585 2.1974274 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 47 0.00108   NR GLE01234.1 114742 g37332 i0 43.9 1.63524590163934 57 22 70.1 1 3 173 48 94 GLE01234.1 hypothetical protein PINS_up010064 [Pythium insidiosum] diamond 399 47 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
27245221 27245221 PRJNA893346_P_NODE_30363_length_269_cov_1.408163_g29873_i0 PRJNA893346 30363 269 1.408163 3.78795847 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0157   NR KAE9248360.1 53985 g29873 i0 31.7 0.702602230483271 63 32 70.3 2 258 70 167 218 KAE9248360.1 hypothetical protein PF002_g5816 [Phytophthora fragariae] diamond 189 43.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
28263367 28263367 PRJNA893346_P_NODE_15186_length_399_cov_1.420245_g14698_i0 PRJNA893346 15186 399 1.420245 5.66677755 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 157 6.2999999999999986e-43   NR OQS06192.1 74557 g14698 i0 55.5 13.4736842105263 128 57 96.2 0 387 4 1 128 OQS06192.1 coronin [Thraustotheca clavata] diamond 5376 157 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28547937 28547937 PRJNA893346_P_NODE_36627_length_246_cov_0.890173_g36137_i0 PRJNA893346 36627 246 0.890173 2.18982558 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 73.9 4.01e-13   NR TMW58082.1 41045 g36137 i0 54.3 1.70731707317073 70 32 85.4 0 36 245 2118 2187 TMW58082.1 hypothetical protein Poli38472_013556 [Pythium oligandrum] diamond 420 73.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28760849 28760849 PRJNA893346_P_NODE_40107_length_239_cov_2.783133_g39617_i0 PRJNA893346 40107 239 2.783133 6.65168787 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 96.7 4.409999999999999e-23   NR KAJ0392104.1 114742 g39617 i0 59.5 0.99163179916318 79 32 99.2 0 3 239 79 157 KAJ0392104.1 hypothetical protein P43SY_009801 [Pythium insidiosum] diamond 237 96.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29045234 29045234 PRJNA893346_P_NODE_36388_length_246_cov_0.890173_g35898_i0 PRJNA893346 36388 246 0.890173 2.18982558 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.12e-5   NR KAJ0395645.1 114742 g35898 i0 41.9 0.75609756097561 62 30 68.3 1 170 3 10 71 KAJ0395645.1 hypothetical protein ATCC90586_003053 [Pythium insidiosum] diamond 186 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29337084 29337084 PRJNA893346_P_NODE_27869_length_285_cov_1.273585_g27379_i0 PRJNA893346 27869 285 1.273585 3.62971725 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 128 4.5599999999999997e-32   NR OQS04148.1 74557 g27379 i0 67.3 26.0526315789474 98 27 97.9 1 285 7 1088 1185 OQS04148.1 structural maintenance of chromosomes protein [Thraustotheca clavata] diamond 7425 128 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29707726 29707726 PRJNA893346_P_NODE_29230_length_276_cov_1.891626_g28740_i0 PRJNA893346 29230 276 1.891626 5.22088776 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 51.6 4.07e-5   NR KAE8902386.1 53985 g28740 i0 38 5.79347826086957 71 41 73.9 1 205 2 49 119 KAE8902386.1 hypothetical protein PF003_g13512 [Phytophthora fragariae] diamond 1599 51.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
30308868 30308868 PRJNA893346_P_NODE_5332_length_703_cov_1.214286_g4875_i0 PRJNA893346 5332 703 1.214286 8.53643058 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 166 3.09e-45   NR CCI40376.1 65357 g4875 i0 41.3 2.68421052631579 223 109 85.8 4 88 690 35 257 CCI40376.1 unnamed protein product [Albugo candida] diamond 1887 166 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
30340520 30340520 PRJNA893346_P_NODE_33352_length_251_cov_0.865169_g32862_i0 PRJNA893346 33352 251 0.865169 2.17157419 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0372   NR KAG9413080.1 112091 g32862 i0 35.8 0.633466135458167 53 33 63.3 1 177 19 126 177 KAG9413080.1 hypothetical protein AC1031_016099 [Aphanomyces cochlioides] diamond 159 42.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
30379702 30379702 PRJNA893346_P_NODE_19612_length_348_cov_1.120000_g19123_i0 PRJNA893346 19612 348 1.12 3.8976 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.08e-5   NR KAF1792090.1 29920 g19123 i0 40.7 2.14655172413793 59 35 50.9 0 177 1 4 62 KAF1792090.1 hypothetical protein GQ600_9459 [Phytophthora cactorum] diamond 747 54.7 0.992687385740402 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
30505764 30505764 PRJNA893346_P_NODE_34113_length_250_cov_0.870056_g33623_i0 PRJNA893346 34113 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 75.9 7.24e-14   NR CAH0479618.1 622444 g33623 i0 46.1 5.808 76 38 91.2 1 228 1 18 90 CAH0479618.1 unnamed protein product [Peronospora belbahrii] diamond 1452 75.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
31074511 31074511 PRJNA893346_P_NODE_23415_length_316_cov_1.395062_g22925_i0 PRJNA893346 23415 316 1.395062 4.40839592 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 132 1.0699999999999998e-37   NR XP_067789141.1 4785 g22925 i0 67.7 11.25 93 29 87.3 1 2 277 8 100 XP_067789141.1 40S ribosomal protein S10 [Phytophthora cinnamomi] diamond 3555 132 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
31762297 31762297 PRJNA893346_P_NODE_25797_length_298_cov_1.773333_g25307_i0 PRJNA893346 25797 298 1.773333 5.28453234 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 86.3 4.95e-19   NR KAF1776885.1 29920 g25307 i0 68.9 0.614093959731544 61 19 61.4 0 112 294 18 78 KAF1776885.1 40S ribosomal protein S11, N-terminal [Phytophthora cactorum] diamond 183 86.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
31991523 31991523 PRJNA893346_P_NODE_35898_length_247_cov_0.885057_g35408_i0 PRJNA893346 35898 247 0.885057 2.18609079 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 144 5.499999999999999e-39   NR OQS00937.1 74557 g35408 i0 85.4 9.95951417004049 82 12 99.6 0 246 1 31 112 OQS00937.1 cystathionine beta-synthase [Thraustotheca clavata] diamond 2460 144 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32553655 32553655 PRJNA893346_P_NODE_31099_length_264_cov_1.612565_g30609_i0 PRJNA893346 31099 264 1.612565 4.2571716 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 92.8 6.1900000000000006e-21   NR GLE04288.1 114742 g30609 i0 54.9 1.03409090909091 91 33 94.3 2 5 253 9 99 GLE04288.1 hypothetical protein PINS_up013203 [Pythium insidiosum] diamond 273 92.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32868216 32868216 PRJNA893346_P_NODE_23200_length_318_cov_1.191837_g22710_i0 PRJNA893346 23200 318 1.191837 3.79004166 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 136 1e-34   NR KAF0688428.1 120398 g22710 i0 60.6 5.12264150943396 109 40 100 2 318 1 367 475 KAF0688428.1 hypothetical protein As57867_019878 [Aphanomyces stellatus] diamond 1629 136 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;