RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA893346", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA893346 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31066879 31066879 PRJNA893346_P_NODE_39795_length_241_cov_0.916667_g39305_i0 PRJNA893346 39795 241 0.916667 2.20916747 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 71.2 2.87e-12   NR MBI5023900.1 2035772 g39305 i0 49.2 1.61825726141079 63 32 78.4 0 2 190 133 195 MBI5023900.1 molecular chaperone DnaJ [Candidatus Omnitrophota bacterium] diamond 390 71.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31446088 31446088 PRJNA893346_P_NODE_8136_length_558_cov_1.501031_g7656_i0 PRJNA893346 8136 558 1.501031 8.37575298 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 54.3 8.33e-5   NR MBF0533231.1 2035772 g7656 i0 24.3 1.59139784946237 136 103 73.1 0 510 103 1622 1757 MBF0533231.1 fibronectin type III domain-containing protein [Candidatus Omnitrophota bacterium] diamond 888 54.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;