RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA893346", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA893346 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31359091 31359091 PRJNA893346_P_NODE_38736_length_243_cov_0.811765_g38246_i0 PRJNA893346 38736 243 0.811765 1.97258895 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.3 8.44e-17   NR XP_001311109.1 412133 g38246 i0 57.9 3.54320987654321 57 24 70.4 0 171 1 7 63 XP_001311109.1 small Rab GTPase Rab1b [Trichomonas vaginalis G3] diamond 861 81.6 0.996323529411765 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31675117 31675117 PRJNA893346_P_NODE_15937_length_389_cov_0.971519_g15449_i0 PRJNA893346 15937 389 0.971519 3.77920891 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.7 4.33e-18   NR XP_067773451.1 135588 g15449 i0 39.3 2.51413881748072 107 64 82.5 1 326 6 12 117 XP_067773451.1 C2 domain containing protein [Histomonas meleagridis] diamond 978 89.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;