RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA893346", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA893346 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9795831 9795831 PRJNA893346_P_NODE_16368_length_383_cov_1.490323_g15880_i0 PRJNA893346 16368 383 1.490323 5.70793709 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 175 1.25e-51   NR GKT34402.1 2918883 g15880 i0 70.6 0.986945169712794 126 36 98.7 1 381 4 51 175 GKT34402.1 60S ribosomal protein L5 [Aduncisulcus paluster] diamond 378 175 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
29613101 29613101 PRJNA893346_P_NODE_25390_length_301_cov_2.131579_g24900_i0 PRJNA893346 25390 301 2.131579 6.41605279 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 130 4.2099999999999995e-37   NR KAG9393782.1 201153 g24900 i0 66.3 1.96345514950166 98 33 97.7 0 294 1 1 98 KAG9393782.1 Ribosomal protein L44e [Carpediemonas membranifera] diamond 591 130 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30435057 30435057 PRJNA893346_P_NODE_19313_length_351_cov_1.107914_g18824_i0 PRJNA893346 19313 351 1.107914 3.88877814 Kipferlia bialata 797122 Fornicata other_Eukaryota 105 3.96e-25   NR GIQ79376.1 797122 g18824 i0 57.5 1.95726495726496 113 47 96.6 1 12 350 16 127 GIQ79376.1 ribosomal protein L7, eukaryotic [Kipferlia bialata] diamond 687 105 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30719025 30719025 PRJNA893346_P_NODE_39274_length_242_cov_0.911243_g38784_i0 PRJNA893346 39274 242 0.911243 2.20520806 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 56.2 6.48e-7   NR GKT17921.1 2918883 g38784 i0 45.3 1.47520661157025 64 34 78.1 1 194 6 7 70 GKT17921.1 Protein phosphatase 2C family like protein [Aduncisulcus paluster] diamond 357 56.2 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;