RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA893346", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 13 ✖

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA893346 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3418757 3418757 PRJNA893346_P_NODE_19703_length_347_cov_1.510949_g19214_i0 PRJNA893346 19703 347 1.510949 5.24299303 Acrasis kona 1008807 Heterolobosea other_Eukaryota 206 4.21e-64   NR KAL0488419.1 1008807 g19214 i0 86.1 35.7925072046109 115 16 99.4 0 345 1 14 128 KAL0488419.1 actin beta/gamma, partial [Acrasis kona] diamond 12420 206 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
9795921 9795921 PRJNA893346_P_NODE_19768_length_347_cov_0.992701_g19279_i0 PRJNA893346 19768 347 0.99270099999999994 3.44467247 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 163 1.4499999999999998e-35   NTclustered gi|290995181|ref|XM_002680150.1| 5762 g19279 i0 83.815 2.23054755043228 173 26 50 2 139 310 636 807 Naegleria gruberi 60S ribosomal protein L2 (NAEGRDRAFT_35785), mRNA blastn 774 163 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17446276 17446276 PRJNA893346_P_NODE_22054_length_327_cov_1.212598_g21565_i0 PRJNA893346 22054 327 1.212598 3.96519546 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 168 1.4499999999999998e-47   NR XP_002683069.1 5762 g21565 i0 77.6 10.0275229357798 107 24 98.2 0 1 321 285 391 XP_002683069.1 uncharacterized protein NAEGRDRAFT_56438 [Naegleria gruberi] diamond 3279 168 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19995011 19995011 PRJNA893346_P_NODE_31896_length_259_cov_1.317204_g31406_i0 PRJNA893346 31896 259 1.317204 3.41155836 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 156 1.75e-33   NTclustered gi|2108229086|ref|XM_002678359.2| 5762 g31406 i0 82.32 5.4980694980695 181 30 69 2 79 258 52 231 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_5552), partial mRNA blastn 1424 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21645420 21645420 PRJNA893346_P_NODE_17997_length_365_cov_1.054795_g17508_i0 PRJNA893346 17997 365 1.054795 3.85000175 Acrasis kona 1008807 Heterolobosea other_Eukaryota 141 3.28e-37   NR KAL0484251.1 1008807 g17508 i0 55.8 1.85753424657534 113 50 92.9 0 339 1 1 113 KAL0484251.1 protein transport Sec61 alpha subunit [Acrasis kona] diamond 678 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27505961 27505961 PRJNA893346_P_NODE_23503_length_315_cov_2.301653_g23013_i0 PRJNA893346 23503 315 2.301653 7.25020695 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 143 1.66e-39   NR XP_044557880.1 5763 g23013 i0 79.3 12.0571428571429 87 18 82.9 0 262 2 7 93 XP_044557880.1 uncharacterized protein FDP41_008374 [Naegleria fowleri] diamond 3798 144 0.993055555555556 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28129575 28129575 PRJNA893346_P_NODE_37745_length_244_cov_0.900585_g37255_i0 PRJNA893346 37745 244 0.900585 2.1974274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 114 8.600000000000001e-30   NR KAL0479481.1 1008807 g37255 i0 73.4 0.971311475409836 79 21 97.1 0 241 5 128 206 KAL0479481.1 hypothetical protein AKO1_007662 [Acrasis kona] diamond 237 114 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28610873 28610873 PRJNA893346_P_NODE_19327_length_351_cov_1.071942_g18838_i0 PRJNA893346 19327 351 1.071942 3.76251642 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 98.2 2.5600000000000003e-22   NR XP_002670923.1 5762 g18838 i0 46.2 2.1025641025641 119 61 99.1 1 2 349 16 134 XP_002670923.1 uncharacterized protein NAEGRDRAFT_74068 [Naegleria gruberi] diamond 738 98.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28729421 28729421 PRJNA893346_P_NODE_35567_length_248_cov_0.880000_g35077_i0 PRJNA893346 35567 248 0.88 2.1824 Acrasis kona 1008807 Heterolobosea other_Eukaryota 52 1.98e-5   NR KAL0483234.1 1008807 g35077 i0 48.1 2.15322580645161 54 24 65.3 2 164 3 2 51 KAL0483234.1 hypothetical protein AKO1_011548 [Acrasis kona] diamond 534 52 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29392544 29392544 PRJNA893346_P_NODE_38669_length_243_cov_0.905882_g38179_i0 PRJNA893346 38669 243 0.905882 2.20129326 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 43.9 0.0144   NR XP_044545096.1 51637 g38179 i0 47.1 0.62962962962963 51 24 63 2 155 3 387 434 XP_044545096.1 uncharacterized protein C9374_008919 [Naegleria lovaniensis] diamond 153 43.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30277124 30277124 PRJNA893346_P_NODE_21152_length_335_cov_1.175573_g20663_i0 PRJNA893346 21152 335 1.175573 3.93816955 Acrasis kona 1008807 Heterolobosea other_Eukaryota 119 6.02e-29   NR KAL0481240.1 1008807 g20663 i0 51.8 5.91044776119403 110 50 98.5 1 332 3 257 363 KAL0481240.1 hypothetical protein AKO1_012828 [Acrasis kona] diamond 1980 119 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32149892 32149892 PRJNA893346_P_NODE_31538_length_261_cov_1.638298_g31048_i0 PRJNA893346 31538 261 1.638298 4.27595778 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84 7.44e-17   NR XP_002671930.1 5762 g31048 i0 56.5 15.5632183908046 62 27 71.3 0 188 3 115 176 XP_002671930.1 guanine nucleotide-binding protein alpha-1 subunit [Naegleria gruberi] diamond 4062 84 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32710757 32710757 PRJNA893346_P_NODE_21400_length_333_cov_0.884615_g20911_i0 PRJNA893346 21400 333 0.884615 2.94576795 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 108 8.45e-25   NR XP_044553835.1 51637 g20911 i0 47.7 1 111 57 99.1 1 3 332 594 704 XP_044553835.1 uncharacterized protein C9374_013426 [Naegleria lovaniensis] diamond 333 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;