RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA893346", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Bacteria · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA893346 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27971564 27971564 PRJNA893346_P_NODE_19505_length_349_cov_1.130435_g19016_i0 PRJNA893346 19505 349 1.130435 3.94521815 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.5 5.57e-10   NR HEY4493706.1 2053589 g19016 i0 46.7 2.33810888252149 60 31 50.7 1 256 80 183 242 HEY4493706.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 816 65.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28823807 28823807 PRJNA893346_P_NODE_15768_length_391_cov_1.367925_g15280_i0 PRJNA893346 15768 391 1.367925 5.34858675 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 59.7 2.11e-7   NR MBF1024810.1 2725942 g15280 i0 38.5 1.91815856777494 130 69 93.6 5 3 368 25 151 MBF1024810.1 hypothetical protein [Candidatus Nanogingivalaceae bacterium] diamond 750 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
28950620 28950620 PRJNA893346_P_NODE_18968_length_354_cov_2.380783_g18479_i0 PRJNA893346 18968 354 2.380783 8.42797182 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 53.5 1.54e-5   NR MDD4383050.1 2053613 g18479 i0 52.1 0.406779661016949 48 23 40.7 0 192 335 78 125 MDD4383050.1 SIMPL domain-containing protein [Candidatus Shapirobacteria bacterium] diamond 144 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
30087125 30087125 PRJNA893346_P_NODE_27032_length_290_cov_1.364055_g26542_i0 PRJNA893346 27032 290 1.364055 3.9557595 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 141 1.14e-38   NR MFA5842134.1 2044595 g26542 i0 69.3 0.910344827586207 88 27 91 0 288 25 234 321 MFA5842134.1 amidohydrolase family protein [Candidatus Altimarinota bacterium] diamond 264 141 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30150157 30150157 PRJNA893346_P_NODE_34172_length_250_cov_0.870056_g33682_i0 PRJNA893346 34172 250 0.870056 2.17514 Patescibacteria group bacterium 2052139 Bacteria Bacteria 53.9 2.91e-7   NR MCL4419652.1 2052139 g33682 i0 43.6 0.936 78 34 87.6 4 14 232 3 75 MCL4419652.1 hypothetical protein [Patescibacteria group bacterium] diamond 234 53.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31287775 31287775 PRJNA893346_P_NODE_10655_length_482_cov_1.432763_g10171_i0 PRJNA893346 10655 482 1.432763 6.90591766 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 45.4 0.0408   NR MCX7046227.1 2107588 g10171 i0 29.9 0.54149377593361 87 50 47.3 2 404 177 21 107 MCX7046227.1 FliI/YscN family ATPase [Candidatus Sumerlaeota bacterium] diamond 261 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31983723 31983723 PRJNA893346_P_NODE_28118_length_283_cov_2.176190_g27628_i0 PRJNA893346 28118 283 2.17619 6.1586177 Candidatus Binatus sp. 2811406 Bacteria Bacteria 43.9 0.00343   NR WP_304820945.1 2811406 g27628 i0 38.5 0.68904593639576 65 37 68.9 1 253 59 12 73 WP_304820945.1 Rdx family protein [Candidatus Binatus sp.] diamond 195 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;