RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA893346", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA893346 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28823807 28823807 PRJNA893346_P_NODE_15768_length_391_cov_1.367925_g15280_i0 PRJNA893346 15768 391 1.367925 5.34858675 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 59.7 2.11e-7   NR MBF1024810.1 2725942 g15280 i0 38.5 1.91815856777494 130 69 93.6 5 3 368 25 151 MBF1024810.1 hypothetical protein [Candidatus Nanogingivalaceae bacterium] diamond 750 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;