RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA891846 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27908136 27908136 PRJNA891846_P_NODE_39365_length_249_cov_0.863636_g39145_i0 PRJNA891846 39365 249 0.863636 2.15045364 archaeon 1906665 Archaea Archaea 47.4 9.44e-4   NR MCQ2821381.1 1906665 g39145 i0 60 0.36144578313253 30 12 36.1 0 4 93 230 259 MCQ2821381.1 hypothetical protein [archaeon] diamond 90 47.4 1 Archaea               archaeon
30877052 30877052 PRJNA891846_P_NODE_27574_length_290_cov_1.156682_g27355_i0 PRJNA891846 27574 290 1.156682 3.3543778 Nitrososphaerales archaeon 2268197 Archaea Archaea 46.6 0.00171   NR MFQ5941235.1 2268197 g27355 i0 32.8 0.693103448275862 67 43 67.2 1 17 211 64 130 MFQ5941235.1 DUF99 family protein [Nitrososphaerales archaeon] diamond 201 46.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;