RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA891846", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA891846 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
867346 867346 PRJNA891846_P_NODE_38101_length_250_cov_0.870056_g37881_i0 PRJNA891846 38101 250 0.870056 2.17514 Prunevirus unicamelliae 3241187 Viruses Viruses 187 5.949999999999998e-43   NTclustered gi|2500380498|ref|NC_076655.1| 2606569 g37881 i0 83.01 0.824 206 35 82 0 42 247 4595 4800 Camellia ringspot associated virus 1 isolate CJ5, complete genome blastn 206 187 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus unicamelliae
9795447 9795447 PRJNA891846_P_NODE_4748_length_664_cov_1.377327_g4543_i0 PRJNA891846 4748 664 1.377327 9.14545128 Camellia japonica associated betaflexivirus 1 2686011 Viruses Viruses 606 1.1299999999999999e-168   NTclustered gi|1785471203|gb|MN532567.1| 2686011 g4543 i0 91.743 5.92771084337349 436 36 98 0 229 664 7000 7435 Camellia japonica associated betaflexivirus 1 isolate CAM2NGS2019 RNA dependent RNA polymerase (ORF1), movement protein (ORF2), and coat protein (ORF3) genes, complete cds blastn 3936 606 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Camellia japonica associated betaflexivirus 1
30348243 30348243 PRJNA891846_P_NODE_42612_length_245_cov_1.790698_g42392_i0 PRJNA891846 42612 245 1.790698 4.3872101 Prunevirus 1914295 Viruses Viruses 164 7.24e-45   NR YP_010799543.1 2606569 g42392 i0 91.4 2.97551020408163 81 7 99.2 0 245 3 1710 1790 YP_010799543.1 replicase [Camellia ringspot associated virus 1] diamond 729 165 0.993939393939394 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Prunevirus Prunevirus unicamelliae
31667366 31667366 PRJNA891846_P_NODE_5457_length_622_cov_1.360656_g5247_i0 PRJNA891846 5457 622 1.360656 8.46328032 Camellia japonica associated betaflexivirus 1 2686011 Viruses Viruses 317 5.049999999999999e-104   NR QGY72523.1 2686011 g5247 i0 98.2 0.795819935691318 165 3 79.6 0 127 621 1 165 QGY72523.1 movement protein [Camellia japonica associated betaflexivirus 1] diamond 495 317 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Camellia japonica associated betaflexivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;