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contig_metadata

23 rows where bioproject = "PRJNA891846" and tax_phylum = "Bacillota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA891846 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
867008 867008 PRJNA891846_P_NODE_24821_length_305_cov_2.034483_g24602_i0 PRJNA891846 24821 305 2.034483 6.20517315 Planococcus sp. 107-1 2908840 Bacteria Bacteria 451 2.3999999999999996e-122   NTclustered gi|2180345768|gb|CP090977.1| 2908840 g24602 i0 93.485 798.963934426229 307 14 99 4 1 304 484683 484986 Planococcus sp. 107-1 chromosome, complete genome blastn 243684 451 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Planococcus Planococcus sp. 107-1
1243171 1243171 PRJNA891846_P_NODE_8621_length_503_cov_2.327907_g8406_i0 PRJNA891846 8621 503 2.327907 11.70937221 Bacillus 1386 Bacteria Bacteria 852 0   NTclustered gi|152022606|gb|CP000764.1| 315749 g8406 i0 97.222 1247.50894632207 504 13 100 1 1 503 90912 90409 Bacillus cytotoxicus NVH 391-98, complete genome blastn 627497 852 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus cytotoxicus
3417939 3417939 PRJNA891846_P_NODE_33003_length_266_cov_1.196891_g32784_i0 PRJNA891846 33003 266 1.196891 3.18373006 Anaerococcus mediterraneensis 1870984 Bacteria Bacteria 472 1.5799999999999998e-128   NTclustered gi|1105524756|emb|LT635772.1| 1870984 g32784 i0 98.864 328.868421052632 264 3 99 0 3 266 437257 437520 Anaerococcus sp. Marseille-P2765 strain Marseille-P2765T genome assembly, chromosome: contig00001 blastn 87479 472 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus mediterraneensis
9795484 9795484 PRJNA891846_P_NODE_5968_length_595_cov_1.408046_g5758_i0 PRJNA891846 5968 595 1.408046 8.3778737 Clostridium beijerinckii 1520 Bacteria Bacteria 1020 0   NTclustered gi|1491812680|gb|CP011966.3| 1428454 g5758 i0 97.647 1004.43865546218 595 13 99 1 2 595 2163159 2162565 Clostridium beijerinckii NRRL B-598, complete genome blastn 597641 1020 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium beijerinckii
10171680 10171680 PRJNA891846_P_NODE_37468_length_250_cov_1.305085_g37248_i0 PRJNA891846 37468 250 1.305085 3.2627125 root 1 Root_unresolved Root_unresolved 462 8.83e-126   NTclustered gi|1796975023|gb|CP033086.1| 1280 g37248 i0 100 38.708 250 0 100 0 1 250 2427794 2427545 Staphylococcus aureus strain WH9628 chromosome blastn 9677 462 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
11070574 11070574 PRJNA891846_P_NODE_26029_length_298_cov_1.293333_g25810_i0 PRJNA891846 26029 298 1.293333 3.85413234 root 1 Root_unresolved Root_unresolved 95.5 2.04e-20   NR WP_330942623.1 1328 g25810 i0 64.4 7.3489932885906 73 26 73.5 0 296 78 411 483 WP_330942623.1 reverse transcriptase domain-containing protein, partial [Streptococcus anginosus] diamond 2190 95.9 0.995828988529718 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus anginosus
13620997 13620997 PRJNA891846_P_NODE_38331_length_249_cov_2.471591_g38111_i0 PRJNA891846 38331 249 2.471591 6.15426159 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 156 2.32e-44   NR MBD5551612.1 1898203 g38111 i0 95.1 1.97590361445783 82 4 98.8 0 248 3 30 111 MBD5551612.1 GDP-mannose 4,6-dehydratase [Lachnospiraceae bacterium] diamond 492 156 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
13621199 13621199 PRJNA891846_P_NODE_46511_length_242_cov_0.911243_g46291_i0 PRJNA891846 46511 242 0.911243 2.20520806 Enterococcus cecorum 44008 Bacteria Bacteria 52.8 0.022   NTclustered gi|2737623164|gb|CP144500.1| 44008 g46291 i0 100 1.15702479338843 28 0 12 0 98 125 981007 981034 Enterococcus cecorum strain 65 chromosome, complete genome blastn 280 52.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus cecorum
17445547 17445547 PRJNA891846_P_NODE_38654_length_249_cov_0.875000_g38434_i0 PRJNA891846 38654 249 0.875 2.17875 Coprococcus phoceensis 1870993 Bacteria Bacteria 444 3.18e-120   NTclustered gi|2777535726|dbj|AP031412.1| 1870993 g38434 i0 98.795 439.421686746988 249 3 100 0 1 249 40693 40941 Coprococcus phoceensis f14 DNA, complete genome blastn 109416 444 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Coprococcus Coprococcus phoceensis
19094657 19094657 PRJNA891846_P_NODE_38595_length_249_cov_0.875000_g38375_i0 PRJNA891846 38595 249 0.875 2.17875 Clostridium 1485 Bacteria Bacteria 52.8 0.023   NTclustered gi|2385532608|gb|CP086246.1| 2843318 g38375 i0 100 0.337349397590361 28 0 11 0 169 196 2522151 2522178 Clostridium sp. CF011 chromosome, complete genome blastn 84 52.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp. CF011
22920720 22920720 PRJNA891846_P_NODE_34618_length_259_cov_1.241935_g34398_i0 PRJNA891846 34618 259 1.241935 3.21661165 Clostridia 186801 Bacteria Bacteria 479 9.13e-131   NTclustered gi|2299490668|gb|CP102292.1| 471875 g34398 i0 100 453.540540540541 259 0 100 0 1 259 373447 373189 [Ruminococcus] lactaris ATCC 29176 chromosome, complete genome blastn 117467 479 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter [Ruminococcus] lactaris
23819385 23819385 PRJNA891846_P_NODE_34239_length_261_cov_1.180851_g34019_i0 PRJNA891846 34239 261 1.180851 3.08202111 Staphylococcus simulans 1286 Bacteria Bacteria 58.4 5.12e-4   NTclustered gi|2312988506|gb|CP094697.1| 1286 g34019 i0 90.909 0.168582375478927 44 2 16 2 53 95 324494 324452 Staphylococcus simulans strain IVB6244 chromosome, complete genome blastn 44 58.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus simulans
26738628 26738628 PRJNA891846_P_NODE_40161_length_248_cov_0.880000_g39941_i0 PRJNA891846 40161 248 0.88 2.1824 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 159 6.499999999999998e-44   NR MDE6951147.1 1898203 g39941 i0 100 1.98387096774194 82 0 99.2 0 1 246 37 118 MDE6951147.1 flagellar biosynthesis protein FlhA [Lachnospiraceae bacterium] diamond 492 159 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
26778658 26778658 PRJNA891846_P_NODE_38421_length_249_cov_1.426136_g38201_i0 PRJNA891846 38421 249 1.426136 3.55107864 Brevibacillus 55080 Bacteria Bacteria 91.7 2.33e-19   NR WP_238504446.1 51101 g38201 i0 59.7 8.55421686746988 72 29 86.7 0 25 240 396 467 WP_238504446.1 M4 family metallopeptidase [Brevibacillus agri] diamond 2130 92.4 0.992424242424242 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus agri
26960479 26960479 PRJNA891846_P_NODE_27562_length_290_cov_1.202765_g27343_i0 PRJNA891846 27562 290 1.202765 3.4880185 Lachnospiraceae bacterium 45-P1 3142752 Bacteria Bacteria 166 2.2099999999999997e-47   NR MEY8396017.1 3142752 g27343 i0 94.8 0.993103448275862 96 5 99.3 0 1 288 249 344 MEY8396017.1 MATE family efflux transporter [Lachnospiraceae bacterium 45-P1] diamond 288 166 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium 45-P1
28950598 28950598 PRJNA891846_P_NODE_27028_length_292_cov_2.287671_g26809_i0 PRJNA891846 27028 292 2.287671 6.67999932 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 45.4 0.00644   NR MBE6645655.1 2485925 g26809 i0 34.7 1.00684931506849 98 44 88.4 4 280 23 123 212 MBE6645655.1 ABC transporter permease [Oscillospiraceae bacterium] diamond 294 45.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
28982158 28982158 PRJNA891846_P_NODE_38568_length_249_cov_0.875000_g38348_i0 PRJNA891846 38568 249 0.875 2.17875 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 152 5.309999999999999e-42   NR HCT90685.1 1898203 g38348 i0 90.1 0.975903614457831 81 8 97.6 0 5 247 231 311 HCT90685.1 D-xylose ABC transporter ATP-binding protein [Lachnospiraceae bacterium] diamond 243 152 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
29013850 29013850 PRJNA891846_P_NODE_44468_length_244_cov_0.900585_g44248_i0 PRJNA891846 44468 244 0.900585 2.1974274 uncultured Anaerococcus sp. 293428 Bacteria Bacteria 140 4.409999999999999e-37   NR WP_311531217.1 293428 g44248 i0 88.8 0.983606557377049 80 9 98.4 0 4 243 27 106 WP_311531217.1 formate--tetrahydrofolate ligase [uncultured Anaerococcus sp.] diamond 240 140 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus uncultured Anaerococcus sp.
29676236 29676236 PRJNA891846_P_NODE_46590_length_242_cov_0.911243_g46370_i0 PRJNA891846 46590 242 0.911243 2.20520806 Lawsonibacter sp. 2185275 Bacteria Bacteria 141 3.75e-38   NR MCI9242031.1 2185275 g46370 i0 97.5 0.991735537190083 80 2 99.2 0 3 242 340 419 MCI9242031.1 S-layer homology domain-containing protein [Lawsonibacter sp.] diamond 240 141 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Lawsonibacter Lawsonibacter sp.
31066845 31066845 PRJNA891846_P_NODE_1155_length_1223_cov_32.578261_g1050_i0 PRJNA891846 1155 1223 32.578261 398.43213203 Virgibacillus sp. 19R1-5 2834410 Bacteria Bacteria 374 8.43e-126   NR WP_213406776.1 2834410 g1050 i0 99.3 0.662305805396566 270 2 66.2 0 1221 412 1 270 WP_213406776.1 hypothetical protein, partial [Virgibacillus sp. 19R1-5] diamond 810 374 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Virgibacillus Virgibacillus sp. 19R1-5
31066858 31066858 PRJNA891846_P_NODE_46275_length_242_cov_0.911243_g46055_i0 PRJNA891846 46275 242 0.911243 2.20520806 Angelakisella sp. 1935177 Bacteria Bacteria 110 1.07e-27   NR MCI9194912.1 1935177 g46055 i0 96.6 0.71900826446281 58 2 71.9 0 241 68 9 66 MCI9194912.1 ATP-binding cassette domain-containing protein [Angelakisella sp.] diamond 174 110 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Angelakisella Angelakisella sp.
31066859 31066859 PRJNA891846_P_NODE_7935_length_523_cov_1.304444_g7720_i0 PRJNA891846 7935 523 1.304444 6.82224212 Lactobacillales bacterium 1993866 Bacteria Bacteria 45.4 0.0206   NR MBE6159497.1 1993866 g7720 i0 29 0.573613766730402 100 58 49.9 2 348 88 49 148 MBE6159497.1 hypothetical protein [Lactobacillales bacterium] diamond 300 45.4 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales     Lactobacillales bacterium
32585085 32585085 PRJNA891846_P_NODE_45299_length_243_cov_0.905882_g45079_i0 PRJNA891846 45299 243 0.905882 2.20129326 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 41.6 0.0185   NR MCI8696622.1 1898203 g45079 i0 44.1 0.728395061728395 59 29 72.8 1 224 48 19 73 MCI8696622.1 hypothetical protein [Lachnospiraceae bacterium] diamond 177 41.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;