RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA891846", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA891846 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25093297 25093297 PRJNA891846_P_NODE_36760_length_251_cov_0.865169_g36540_i0 PRJNA891846 36760 251 0.865169 2.17157419 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 52.8 0.023   NTclustered gi|2621704042|emb|OY760734.1| 2910147 g36540 i0 96.875 0.127490039840637 32 0 13 1 10 41 3645464 3645434 MAG: Vicinamibacterales bacterium isolate 10b48155-431e-4809-9d43-759f23ff96f9 genome assembly, chromosome: 1 blastn 32 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29613073 29613073 PRJNA891846_P_NODE_10790_length_456_cov_1.005222_g10573_i0 PRJNA891846 10790 456 1.005222 4.58381232 Bryobacterales bacterium 2026791 Bacteria Bacteria 46.2 0.0179   NR MBL0159974.1 2026791 g10573 i0 30.3 0.5 76 53 50 0 262 35 100 175 MBL0159974.1 ATP-dependent 6-phosphofructokinase [Bryobacterales bacterium] diamond 228 46.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
30245350 30245350 PRJNA891846_P_NODE_45892_length_242_cov_0.911243_g45672_i0 PRJNA891846 45892 242 0.911243 2.20520806 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 43.1 0.0261   NR MEO8726287.1 2052142 g45672 i0 37.5 0.59504132231405 48 30 59.5 0 67 210 354 401 MEO8726287.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 144 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
31762283 31762283 PRJNA891846_P_NODE_47457_length_241_cov_0.916667_g47237_i0 PRJNA891846 47457 241 0.916667 2.20916747 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0254   NR MEO8519822.1 1978231 g47237 i0 40.9 0.821576763485477 66 30 72.2 3 15 188 79 143 MEO8519822.1 HD domain-containing protein [Acidobacteriota bacterium] diamond 198 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;