RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA891846", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29866045 29866045 PRJNA891846_P_NODE_17271_length_365_cov_1.958904_g17052_i0 PRJNA891846 17271 365 1.958904 7.1499996 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 67.4 3.72e-10   NR KAJ8025262.1 206669 g17052 i0 49.3 0.567123287671233 69 22 49.3 3 362 183 1529 1593 KAJ8025262.1 SCO-spondin [Holothuria leucospilota] diamond 207 67.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30118648 30118648 PRJNA891846_P_NODE_30232_length_278_cov_1.502439_g30013_i0 PRJNA891846 30232 278 1.502439 4.17678042 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 82 8.75e-16   NR XP_030854836.1 7668 g30013 i0 45.2 0.787769784172662 73 40 78.8 0 10 228 591 663 XP_030854836.1 tetratricopeptide repeat protein 27 [Strongylocentrotus purpuratus] diamond 219 82 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
31541024 31541024 PRJNA891846_P_NODE_17796_length_360_cov_1.783972_g17577_i0 PRJNA891846 17796 360 1.783972 6.4222992 Anneissia japonica 1529436 Echinodermata other_Eukaryota 97.8 4.88e-21   NR XP_033123084.1 1529436 g17577 i0 43.5 4.15 108 61 90 0 327 4 190 297 XP_033123084.1 pumilio homolog 3-like [Anneissia japonica] diamond 1494 97.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;