RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA891846", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5970647 5970647 PRJNA891846_P_NODE_42325_length_246_cov_0.890173_g42105_i0 PRJNA891846 42325 246 0.890173 2.18982558 Hydra vulgaris 6087 Cnidaria other_Eukaryota 80.5 1.02e-10   NTclustered gi|2744882156|ref|XM_065807238.1| 6087 g42105 i0 89.062 1.05691056910569 64 7 26 0 1 64 4598 4661 PREDICTED: Hydra vulgaris pre-mRNA-processing-splicing factor 8 (LOC100198004), transcript variant X2, mRNA blastn 260 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
16545721 16545721 PRJNA891846_P_NODE_47873_length_233_cov_2.800000_g47653_i0 PRJNA891846 47873 233 2.8 6.524 Opisthokonta 33154 Cnidaria other_Eukaryota 135 2e-35   NR XP_057291046.1 13093 g47653 i0 81.6 4.90557939914163 76 14 97.9 0 231 4 382 457 XP_057291046.1 glucose-6-phosphate isomerase-like isoform X2 [Hydractinia symbiolongicarpus] diamond 1143 135 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
26999915 26999915 PRJNA891846_P_NODE_44542_length_244_cov_0.888889_g44322_i0 PRJNA891846 44542 244 0.888889 2.16888916 Actiniaria 6103 Cnidaria other_Eukaryota 90.9 4.37e-19   NR XP_048582661.1 45351 g44322 i0 55.1 3.83606557377049 78 35 95.9 0 235 2 285 362 XP_048582661.1 uncharacterized protein LOC125561901 [Nematostella vectensis] diamond 936 90.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
27435059 27435059 PRJNA891846_P_NODE_33443_length_264_cov_1.591623_g33224_i0 PRJNA891846 33443 264 1.591623 4.20188472 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 70.5 8.08e-12   NR XP_046859640.1 2897299 g33224 i0 41.7 6.81818181818182 84 43 95.5 1 2 253 61 138 XP_046859640.1 poly(A)-specific ribonuclease PARN-like [Xenia sp. Carnegie-2017] diamond 1800 70.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
28129555 28129555 PRJNA891846_P_NODE_39885_length_248_cov_0.880000_g39665_i0 PRJNA891846 39885 248 0.88 2.1824 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 43.5 0.021   NR XP_066930065.1 252671 g39665 i0 30.6 0.592741935483871 49 34 59.3 0 95 241 376 424 XP_066930065.1 TBC1 domain family member 22B-like [Clytia hemisphaerica] diamond 147 43.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
30466635 30466635 PRJNA891846_P_NODE_11273_length_447_cov_2.085561_g11056_i0 PRJNA891846 11273 447 2.085561 9.32245767 Acropora digitifera 70779 Cnidaria other_Eukaryota 132 1.6200000000000002e-33   NR XP_015748371.1 70779 g11056 i0 45.4 0.946308724832215 141 75 94.6 2 424 2 272 410 XP_015748371.1 PREDICTED: gastric triacylglycerol lipase-like [Acropora digitifera] diamond 423 132 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;