RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA891846", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4695550 4695550 PRJNA891846_P_NODE_30484_length_277_cov_1.460784_g30265_i0 PRJNA891846 30484 277 1.460784 4.04637168 Linderina pennispora 61395 Fungi Fungi 165 3.14e-36   NTclustered gi|2028324866|ref|XM_040885706.1| 61395 g30265 i0 87.075 53.956678700361 147 18 53 1 2 147 147 1 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_259616), partial mRNA blastn 14946 165 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
11070540 11070540 PRJNA891846_P_NODE_24289_length_309_cov_1.233051_g24070_i0 PRJNA891846 24289 309 1.233051 3.81012759 Kickxella alabastrina 61397 Fungi Fungi 67.6 1.03e-6   NTclustered gi|2324021364|ref|XM_051537514.1| 61397 g24070 i0 73.469 0.634304207119741 196 44 62 8 48 239 699 508 Kickxella alabastrina uncharacterized protein (BX661DRAFT_188990), mRNA blastn 196 67.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
29013847 29013847 PRJNA891846_P_NODE_39748_length_248_cov_0.880000_g39528_i0 PRJNA891846 39748 248 0.88 2.1824 Neoconidiobolus thromboides FSU 785 1314799 Fungi Fungi 51.2 3.88e-5   NR KAI9296464.1 1314799 g39528 i0 35.4 0.786290322580645 65 42 78.6 0 196 2 71 135 KAI9296464.1 AB-hydrolase YheT [Neoconidiobolus thromboides FSU 785] diamond 195 51.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;