RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA891846", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28958375 28958375 PRJNA891846_P_NODE_30168_length_279_cov_1.014563_g29949_i0 PRJNA891846 30168 279 1.014563 2.83063077 Fungi 4751 Fungi Fungi 46.2 0.00187   NR KAI9007759.1 82268 g29949 i0 59 2.61290322580645 39 16 41.9 0 109 225 72 110 KAI9007759.1 hypothetical protein DFJ74DRAFT_689029 [Hyaloraphidium curvatum] diamond 729 46.6 0.991416309012876 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29392515 29392515 PRJNA891846_P_NODE_35309_length_256_cov_1.262295_g35089_i0 PRJNA891846 35309 256 1.262295 3.2314752 Rhizophlyctis rosea 64517 Fungi Fungi 45.1 0.00647   NR KAJ3044312.1 64517 g35089 i0 36.7 0.92578125 79 48 91.4 2 11 244 36 113 KAJ3044312.1 hypothetical protein HDV00_002632 [Rhizophlyctis rosea] diamond 237 45.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
29581511 29581511 PRJNA891846_P_NODE_35010_length_257_cov_1.673913_g34790_i0 PRJNA891846 35010 257 1.673913 4.30195641 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 133 4.09e-34   NR KAH9253194.1 1357716 g34790 i0 77.3 0.875486381322957 75 17 87.5 0 255 31 9 83 KAH9253194.1 hypothetical protein BASA81_008876 [Batrachochytrium salamandrivorans] diamond 225 133 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
29929398 29929398 PRJNA891846_P_NODE_40971_length_247_cov_0.885057_g40751_i0 PRJNA891846 40971 247 0.885057 2.18609079 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 147 3.35e-40   NR KAH9258324.1 1357716 g40751 i0 80.5 0.995951417004049 82 16 99.6 0 247 2 257 338 KAH9258324.1 hypothetical protein BASA81_003373 [Batrachochytrium salamandrivorans] diamond 246 147 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31003500 31003500 PRJNA891846_P_NODE_38174_length_250_cov_0.870056_g37954_i0 PRJNA891846 38174 250 0.870056 2.17514 Kappamyces sp. JEL 2040833 Fungi Fungi 71.6 9.24e-14   NR KAJ3304877.1 2724216 g37954 i0 51.3 1.884 78 38 93.6 0 236 3 11 88 KAJ3304877.1 histone H2B [Kappamyces sp. JEL0829] diamond 471 71.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Kappamycetaceae Kappamyces Kappamyces sp. JEL0829
32332215 32332215 PRJNA891846_P_NODE_29299_length_282_cov_2.038278_g29080_i0 PRJNA891846 29299 282 2.038278 5.74794396 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 133 2.66e-37   NR KAH9259488.1 1357716 g29080 i0 72 0.872340425531915 82 23 87.2 0 37 282 22 103 KAH9259488.1 hypothetical protein BASA81_002531 [Batrachochytrium salamandrivorans] diamond 246 133 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;