RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA891846 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12346074 12346074 PRJNA891846_P_NODE_27410_length_290_cov_2.806452_g27191_i0 PRJNA891846 27410 290 2.806452 8.1387108 Candidatus Promineifilum breve 1806508 Bacteria Bacteria 355 1.8299999999999997e-93   NTclustered gi|1041165931|emb|LN890655.2| 1806508 g27191 i0 89.606 464.041379310345 279 29 96 0 3 281 597427 597705 Ardenticatena sp. Cfx-K strain Cfx-K genome assembly, chromosome: I blastn 134572 355 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Candidatus Promineifilum breve
14895508 14895508 PRJNA891846_P_NODE_45872_length_242_cov_0.911243_g45652_i0 PRJNA891846 45872 242 0.911243 2.20520806 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 149 6.93e-41   NR MFN5676824.1 2762507 g45652 i0 90 2.97520661157025 80 8 99.2 0 242 3 320 399 MFN5676824.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA [Roseiflexaceae bacterium] diamond 720 149 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;