RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17445760 17445760 PRJNA891846_P_NODE_48114_length_206_cov_5.902256_g47894_i0 PRJNA891846 48114 206 5.902256 12.15864736 Cryothecomonas sp. APCC MC5-1Cryo 741088 SAR_Eukaryotes SAR_Eukaryotes 313 7.479999999999998e-81   NTclustered gi|290760480|gb|GQ144683.1| 741088 g47894 i0 94.146 100.087378640777 205 10 99 2 3 206 1805 1602 Cryothecomonas sp. APCC MC5-1Cryo large subunit ribosomal RNA gene, partial sequence blastn 20618 313 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Cryothecomonas Cryothecomonas sp. APCC MC5-1Cryo
31675113 31675113 PRJNA891846_P_NODE_42557_length_246_cov_0.861272_g42337_i0 PRJNA891846 42557 246 0.861272 2.11872912 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.19e-16   NR MES1907130.1 1215613 g42337 i0 49.2 3.42682926829268 63 32 76.8 0 57 245 17 79 MES1907130.1 proline iminopeptidase-like protein [Cercozoa sp. M6MM] diamond 843 78.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;