RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA891846 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5071195 5071195 PRJNA891846_P_NODE_36324_length_251_cov_2.539326_g36104_i0 PRJNA891846 36324 251 2.539326 6.37370826 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 464 2.47e-126   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g36104 i0 100 99.9482071713147 251 0 100 0 1 251 1232 982 Plasmodium berghei p23-like protein mRNA, partial cds blastn 25087 464 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
19094616 19094616 PRJNA891846_P_NODE_25775_length_299_cov_2.628319_g25556_i0 PRJNA891846 25775 299 2.628319 7.85867381 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|915136483|ref|XM_013481102.1| 5804 g25556 i0 100 0.280936454849498 28 0 9 0 217 244 3627 3654 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 84 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;