contig_metadata
5 rows where bioproject = "PRJNA891846", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 867419 | 867419 | PRJNA891846_P_NODE_41121_length_247_cov_0.885057_g40901_i0 | PRJNA891846 | 41121 | 247 | 0.885057 | 2.18609079 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 191 | 4.53e-44 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g40901 | i0 | 80.723 | 38.4817813765182 | 249 | 44 | 100 | 3 | 1 | 247 | 453747 | 453501 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 9505 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 27908143 | 27908143 | PRJNA891846_P_NODE_46145_length_242_cov_0.911243_g45925_i0 | PRJNA891846 | 46145 | 242 | 0.911243 | 2.20520806 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 122 | 3.52e-30 | NR | MAD26228.1 | 2026801 | g45925 | i0 | 69.6 | 0.979338842975207 | 79 | 24 | 97.9 | 0 | 239 | 3 | 1303 | 1381 | MAD26228.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 237 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 27940103 | 27940103 | PRJNA891846_P_NODE_37625_length_250_cov_0.870056_g37405_i0 | PRJNA891846 | 37625 | 250 | 0.870056 | 2.17514 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 136 | 4.58e-35 | NR | WP_395716847.1 | 1965333 | g37405 | i0 | 92.8 | 1.992 | 83 | 6 | 99.6 | 0 | 2 | 250 | 196 | 278 | WP_395716847.1 tetratricopeptide repeat protein [Prosthecobacter sp.] | diamond | 498 | 136 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 28350426 | 28350426 | PRJNA891846_P_NODE_44966_length_243_cov_0.905882_g44746_i0 | PRJNA891846 | 44966 | 243 | 0.905882 | 2.20129326 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 64.3 | 9.33e-10 | NR | HEX2852909.1 | 2006848 | g44746 | i0 | 53.3 | 0.740740740740741 | 60 | 27 | 72.8 | 1 | 178 | 2 | 669 | 728 | HEX2852909.1 immunoglobulin domain-containing protein [Opitutaceae bacterium] | diamond | 180 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 32205337 | 32205337 | PRJNA891846_P_NODE_43238_length_245_cov_0.895349_g43018_i0 | PRJNA891846 | 43238 | 245 | 0.895349 | 2.19360505 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 163 | 1.24e-45 | NR | NBV38207.1 | 2026799 | g43018 | i0 | 95.1 | 0.991836734693878 | 81 | 4 | 99.2 | 0 | 244 | 2 | 62 | 142 | NBV38207.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [Verrucomicrobiota bacterium] | diamond | 243 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;