RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

analysis 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA891846 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21269147 21269147 PRJNA891846_P_NODE_33417_length_264_cov_1.612565_g33198_i0 PRJNA891846 33417 264 1.612565 4.2571716 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 62.1 4.01e-5   NTclustered gi|2806478459|ref|XM_068510640.1| 1144522 g33198 i0 84.848 11.8939393939394 66 5 25 2 113 178 1897 1957 Tritrichomonas foetus SNF2 family N-terminal domain containing protein (TRFO_36114), partial mRNA blastn 3140 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31572745 31572745 PRJNA891846_P_NODE_41256_length_247_cov_0.885057_g41036_i0 PRJNA891846 41256 247 0.885057 2.18609079 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 42.7 0.0394   NR XP_067760574.1 348837 g41036 i0 40.7 0.65587044534413 54 30 63.2 1 2 157 221 274 XP_067760574.1 hypothetical protein SS50377_27770 [Spironucleus salmonicida] diamond 162 42.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;