RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA891846" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA891846 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26770749 26770749 PRJNA891846_P_NODE_41401_length_247_cov_0.885057_g41181_i0 PRJNA891846 41401 247 0.885057 2.18609079 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 68.9 8.45e-12   NR NVP17342.1 2044595 g41181 i0 75 0.437246963562753 36 9 43.7 0 241 134 105 140 NVP17342.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 108 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27695490 27695490 PRJNA891846_P_NODE_44664_length_243_cov_1.558824_g44444_i0 PRJNA891846 44664 243 1.558824 3.78794232 Bacteria 2 Bacteria Bacteria 87.8 5.92e-20   NR MBU4315506.1 2052139 g44444 i0 56.6 13.3086419753086 76 33 93.8 0 242 15 41 116 MBU4315506.1 single-stranded DNA-binding protein [Patescibacteria group bacterium] diamond 3234 88.6 0.99097065462754 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;