RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA890871" and tax_phylum = "Vulcanimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA890871 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2140648 2140648 PRJNA890871_P_NODE_8002_length_538_cov_5.931183_g7867_i0 PRJNA890871 8002 538 5.931183 31.90976454 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 111 2.34e-26   NR HYK54754.1 3069296 g7867 i0 40.3 0.719330855018587 129 72 69.1 2 387 16 15 143 HYK54754.1 prolipoprotein diacylglyceryl transferase [Candidatus Eremiobacteraceae bacterium] diamond 387 111 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
31604234 31604234 PRJNA890871_P_NODE_75756_length_245_cov_1.738372_g75621_i0 PRJNA890871 75756 245 1.738372 4.2590114 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 136 4.06e-38   NR MFA7484292.1 3107663 g75621 i0 74.1 1.98367346938776 81 21 99.2 0 3 245 39 119 MFA7484292.1 Rpn family recombination-promoting nuclease/putative transposase [Vulcanimicrobiota bacterium] diamond 486 136 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;