RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA890871" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA890871 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
864557 864557 PRJNA890871_P_NODE_43781_length_276_cov_1.231527_g43646_i0 PRJNA890871 43781 276 1.231527 3.39901452 Mucor plumbeus 97098 Fungi Fungi 147 1.34e-38   NR KAG2193467.1 97098 g43646 i0 77.2 5 92 21 100 0 276 1 123 214 KAG2193467.1 hypothetical protein INT46_007735, partial [Mucor plumbeus] diamond 1380 147 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
9793015 9793015 PRJNA890871_P_NODE_72368_length_247_cov_0.885057_g72233_i0 PRJNA890871 72368 247 0.885057 2.18609079 Cokeromyces recurvatus 90255 Fungi Fungi 163 9.88e-36   NTclustered gi|2324083841|ref|XM_051523433.1| 90255 g72233 i0 84.663 1.35627530364372 163 25 66 0 85 247 697 535 Cokeromyces recurvatus meiotic recombinase Dmc1 (BX663DRAFT_441048), partial mRNA blastn 335 163 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
17443609 17443609 PRJNA890871_P_NODE_90774_length_230_cov_2.828025_g90639_i0 PRJNA890871 90774 230 2.828025 6.5044575 Mucor velutinosus 708070 Fungi Fungi 185 1.94e-42   NTclustered gi|2724932545|ref|XM_064824701.1| 708070 g90639 i0 90.647 0.604347826086956 139 13 60 0 8 146 161 23 Mucor velutinosus NADH:ubiquinone oxidoreductase 24 (NUO24), partial mRNA blastn 139 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
21644706 21644706 PRJNA890871_P_NODE_48717_length_268_cov_2.194872_g48582_i0 PRJNA890871 48717 268 2.194872 5.88225696 Mucor 4830 Fungi Fungi 496 9.429999999999999e-136   NTclustered gi|908373101|gb|JF723685.2| 4841 g48582 i0 100 100 268 0 100 0 1 268 577 844 Mucor racemosus strain CBS 115.08 18S ribosomal RNA gene, partial sequence blastn 26800 496 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
23816543 23816543 PRJNA890871_P_NODE_35939_length_290_cov_1.419355_g35804_i0 PRJNA890871 35939 290 1.419355 4.1161295 Mucor racemosus 4841 Fungi Fungi 536 6.079999999999999e-148   NTclustered gi|225134681|gb|FJ345353.1| 4841 g35804 i0 100 56.5172413793103 290 0 100 0 1 290 2239 2528 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16390 536 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
27505947 27505947 PRJNA890871_P_NODE_41243_length_280_cov_1.425121_g41108_i0 PRJNA890871 41243 280 1.425121 3.9903388 Mucorales 4827 Fungi Fungi 150 8.14e-43   NR CEP08802.1 35722 g41108 i0 78 11.7 91 20 97.5 0 273 1 130 220 CEP08802.1 hypothetical protein [Parasitella parasitica] diamond 3276 151 0.993377483443709 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica
28097786 28097786 PRJNA890871_P_NODE_65645_length_250_cov_0.870056_g65510_i0 PRJNA890871 65645 250 0.870056 2.17514 Mucor plumbeus 97098 Fungi Fungi 145 8.71e-40   NR KAG2203086.1 97098 g65510 i0 89 0.984 82 9 98.4 0 248 3 136 217 KAG2203086.1 hypothetical protein INT46_005043 [Mucor plumbeus] diamond 246 145 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
30087072 30087072 PRJNA890871_P_NODE_78052_length_244_cov_1.736842_g77917_i0 PRJNA890871 78052 244 1.736842 4.23789448 Mucor plumbeus 97098 Fungi Fungi 160 1.2999999999999996e-43   NR KAG2192522.1 97098 g77917 i0 98.8 0.983606557377049 80 1 98.4 0 242 3 408 487 KAG2192522.1 hypothetical protein INT46_004632 [Mucor plumbeus] diamond 240 160 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
30126352 30126352 PRJNA890871_P_NODE_84052_length_242_cov_0.911243_g83917_i0 PRJNA890871 84052 242 0.911243 2.20520806 Mucor 4830 Fungi Fungi 149 3.2999999999999987e-41   NR KAF1803436.1 29924 g83917 i0 88.8 1.98347107438017 80 9 99.2 0 241 2 47 126 KAF1803436.1 auxin efflux carrier [Mucor lusitanicus] diamond 480 150 0.993333333333333 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus
30245284 30245284 PRJNA890871_P_NODE_2612_length_988_cov_6.893989_g2491_i0 PRJNA890871 2612 988 6.893989 68.11261132 Gigaspora margarita 4874 Fungi Fungi 47.8 0.049   NR KAF0406850.1 4874 g2491 i0 28.7 0.497975708502024 164 100 48.3 6 587 111 228 379 KAF0406850.1 hypothetical protein F8M41_008815 [Gigaspora margarita] diamond 492 47.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
30371934 30371934 PRJNA890871_P_NODE_82172_length_242_cov_3.224852_g82037_i0 PRJNA890871 82172 242 3.224852 7.80414184 Parasitella parasitica 35722 Fungi Fungi 136 4.87e-35   NR CEP08728.1 35722 g82037 i0 80 1.98347107438017 80 16 99.2 0 241 2 25 104 CEP08728.1 hypothetical protein [Parasitella parasitica] diamond 480 136 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica
30750733 30750733 PRJNA890871_P_NODE_53914_length_261_cov_2.138298_g53779_i0 PRJNA890871 53914 261 2.138298 5.58095778 Rhizophagus irregularis DAOM 197198w 1432141 Fungi Fungi 56.6 6.99e-8   NR EXX78851.1 1432141 g53779 i0 68.8 0.367816091954023 32 10 36.8 0 2 97 91 122 EXX78851.1 hypothetical protein RirG_011270 [Rhizophagus irregularis DAOM 197198w] diamond 96 56.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
31066807 31066807 PRJNA890871_P_NODE_2115_length_1169_cov_4.135036_g1999_i0 PRJNA890871 2115 1169 4.135036 48.33857084 Rhizophagus irregularis 588596 Fungi Fungi 75.9 2.84e-11   NR PKY22945.1 588596 g1999 i0 42.9 0.269461077844311 105 57 26.2 1 405 100 100 204 PKY22945.1 HCP-like protein [Rhizophagus irregularis] diamond 315 75.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
31295648 31295648 PRJNA890871_P_NODE_87435_length_239_cov_2.765060_g87300_i0 PRJNA890871 87435 239 2.76506 6.6084934 Fungi 4751 Fungi Fungi 56.6 4.36e-7   NR KAI8074382.1 101105 g87300 i0 88.5 1.63179916317992 26 3 32.6 0 8 85 347 372 KAI8074382.1 PQQ repeat-containing enzyme [Gongronella butleri] diamond 390 57 0.992982456140351 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Gongronella Gongronella butleri
31888723 31888723 PRJNA890871_P_NODE_58057_length_256_cov_1.683060_g57922_i0 PRJNA890871 58057 256 1.68306 4.3086336 Mucor plumbeus 97098 Fungi Fungi 112 1.08e-27   NR KAG2193113.1 97098 g57922 i0 96.9 0.75 64 2 75 0 214 23 1 64 KAG2193113.1 hypothetical protein INT46_009799 [Mucor plumbeus] diamond 192 112 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;