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contig_metadata

14 rows where bioproject = "PRJNA890871" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA890871 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4692537 4692537 PRJNA890871_P_NODE_28044_length_319_cov_1.719512_g27909_i0 PRJNA890871 28044 319 1.719512 5.48524328 Halorubrum sp. DM2 2527867 Archaea Archaea 54.7 0.008   NTclustered gi|2474087799|emb|LR594487.1| 2527867 g27909 i0 100 0.0909090909090909 29 0 9 0 21 49 2285676 2285648 Halorubrum sp. DM2 isolate Halorubrum diamantensis DM21 genome assembly, chromosome: 1 blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. DM2
8517435 8517435 PRJNA890871_P_NODE_44987_length_274_cov_1.318408_g44852_i0 PRJNA890871 44987 274 1.318408 3.61243792 Halobaculum rubrum 2872158 Archaea Archaea 56.5 0.002   NTclustered gi|2090002430|gb|CP082284.1| 2872158 g44852 i0 97.059 0.124087591240876 34 0 12 1 238 270 2015418 2015451 Halobaculum rubrum strain C46 chromosome, complete genome blastn 34 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum rubrum
9793394 9793394 PRJNA890871_P_NODE_93408_length_210_cov_4.145985_g93273_i0 PRJNA890871 93408 210 4.145985 8.7065685 Methanosarcina sp. Kolksee 1434099 Archaea Archaea 54.7 0.005   NTclustered gi|805394978|gb|CP009524.1| 1434099 g93273 i0 100 0.138095238095238 29 0 14 0 19 47 991096 991068 Methanosarcina sp. Kolksee, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. Kolksee
28161155 28161155 PRJNA890871_P_NODE_10765_length_472_cov_6.290727_g10630_i0 PRJNA890871 10765 472 6.290727 29.69223144 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 53.9 3.61e-5   NR NMC58615.1 2099674 g10630 i0 41.8 1.04872881355932 55 32 35 0 471 307 216 270 NMC58615.1 hypothetical protein [Candidatus Methanofastidiosia archaeon] diamond 495 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
30371916 30371916 PRJNA890871_P_NODE_34412_length_294_cov_3.466063_g34277_i0 PRJNA890871 34412 294 3.466063 10.19022522 Methanobrevibacter sp. 66852 Archaea Archaea 79.3 3.66e-17   NR MBO6110342.1 66852 g34277 i0 55.1 0.704081632653061 69 31 70.4 0 272 66 1 69 MBO6110342.1 hypothetical protein [Methanobrevibacter sp.] diamond 207 79.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30466596 30466596 PRJNA890871_P_NODE_17853_length_382_cov_1.750809_g17718_i0 PRJNA890871 17853 382 1.750809 6.68809038 Methanobrevibacter sp. 66852 Archaea Archaea 62.4 1.75e-8   NR MBP3225391.1 66852 g17718 i0 49.2 0.479057591623037 61 30 47.1 1 200 379 1 61 MBP3225391.1 hypothetical protein [Methanobrevibacter sp.] diamond 183 62.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30687351 30687351 PRJNA890871_P_NODE_5253_length_656_cov_2.828473_g5118_i0 PRJNA890871 5253 656 2.828473 18.55478288 Methanofastidiosum sp. 2666341 Archaea Archaea 65.5 9.31e-10   NR MFA5559230.1 2666341 g5118 i0 36 0.507621951219512 111 66 48.5 2 6 323 9 119 MFA5559230.1 hypothetical protein [Methanofastidiosum sp.] diamond 333 65.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
30813815 30813815 PRJNA890871_P_NODE_94194_length_198_cov_7.144000_g94059_i0 PRJNA890871 94194 198 7.144 14.14512 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 44.7 0.00404   NR NMC58615.1 2099674 g94059 i0 53.8 0.590909090909091 39 18 59.1 0 15 131 233 271 NMC58615.1 hypothetical protein [Candidatus Methanofastidiosia archaeon] diamond 117 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
30845484 30845484 PRJNA890871_P_NODE_1594_length_1521_cov_4.435083_g1493_i0 PRJNA890871 1594 1521 4.435083 67.45761243 Methanobrevibacter sp. 66852 Archaea Archaea 110 1.53e-25   NR MBO6110343.1 66852 g1493 i0 71 0.258382642998028 69 20 13.6 0 993 787 1 69 MBO6110343.1 hypothetical protein [Methanobrevibacter sp.] diamond 393 110 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31161003 31161003 PRJNA890871_P_NODE_1755_length_1393_cov_3.536364_g1649_i0 PRJNA890871 1755 1393 3.536364 49.26155052 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 110 3.909999999999999e-23   NR NMC58615.1 2099674 g1649 i0 35.2 0.525484565685571 244 142 50.6 10 71 775 35 271 NMC58615.1 hypothetical protein [Candidatus Methanofastidiosia archaeon] diamond 732 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
32078659 32078659 PRJNA890871_P_NODE_9778_length_492_cov_2.634845_g9643_i0 PRJNA890871 9778 492 2.634845 12.9634374 Methanobrevibacter sp. 66852 Archaea Archaea 65.1 1.69e-10   NR MBO6109614.1 66852 g9643 i0 38.8 0.48780487804878 80 47 48.8 1 322 83 5 82 MBO6109614.1 hypothetical protein [Methanobrevibacter sp.] diamond 240 65.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32426770 32426770 PRJNA890871_P_NODE_37859_length_286_cov_1.863850_g37724_i0 PRJNA890871 37859 286 1.86385 5.330611 Methanobacteriota archaeon 2026739 Archaea Archaea 132 5.56e-38   NR MCH7659049.1 2026739 g37724 i0 100 0.723776223776224 69 0 72.4 0 3 209 36 104 MCH7659049.1 AzlD domain-containing protein [Methanobacteriota archaeon] diamond 207 132 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32585025 32585025 PRJNA890871_P_NODE_22159_length_350_cov_2.014440_g22024_i0 PRJNA890871 22159 350 2.01444 7.05054 Haloarculaceae archaeon 2497615 Archaea Archaea 43.9 0.0419   NR MFB6172384.1 2497615 g22024 i0 35.6 0.865714285714286 101 64 86.6 1 1 303 15 114 MFB6172384.1 SDR family oxidoreductase [Haloarculaceae archaeon] diamond 303 43.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
32616338 32616338 PRJNA890871_P_NODE_3940_length_762_cov_6.965167_g3809_i0 PRJNA890871 3940 762 6.965167 53.07457254 Methanobrevibacter sp. 66852 Archaea Archaea 240 2.3e-76   NR MBO6110344.1 66852 g3809 i0 71.7 0.653543307086614 166 47 65.4 0 263 760 3 168 MBO6110344.1 hypothetical protein [Methanobrevibacter sp.] diamond 498 240 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;