contig_metadata
14 rows where bioproject = "PRJNA890871" and tax_phylum = "Ignavibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22541450 | 22541450 | PRJNA890871_P_NODE_48278_length_269_cov_1.505102_g48143_i0 | PRJNA890871 | 48278 | 269 | 1.505102 | 4.04872438 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 173 | 7.36e-50 | NR | HMS34157.1 | 2053306 | g48143 | i0 | 91 | 5.95539033457249 | 89 | 8 | 99.3 | 0 | 268 | 2 | 26 | 114 | HMS34157.1 dihydrolipoyl dehydrogenase [Ignavibacteria bacterium] | diamond | 1602 | 173 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 26643888 | 26643888 | PRJNA890871_P_NODE_69441_length_248_cov_1.360000_g69306_i0 | PRJNA890871 | 69441 | 248 | 1.36 | 3.3728 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 149 | 1.3e-40 | NR | HWA05074.1 | 2053306 | g69306 | i0 | 81.7 | 0.991935483870968 | 82 | 15 | 99.2 | 0 | 3 | 248 | 219 | 300 | HWA05074.1 hypothetical protein [Ignavibacteria bacterium] | diamond | 246 | 149 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 26897471 | 26897471 | PRJNA890871_P_NODE_3701_length_789_cov_6.072626_g3571_i0 | PRJNA890871 | 3701 | 789 | 6.072626 | 47.91301914 | Melioribacter sp. | 2052167 | Bacteria | Bacteria | 47.4 | 0.0189 | NR | MCX7797202.1 | 2052167 | g3571 | i0 | 41.3 | 0.239543726235741 | 63 | 37 | 24 | 0 | 204 | 16 | 1 | 63 | MCX7797202.1 DUF502 domain-containing protein [Melioribacter sp.] | diamond | 189 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteriales | Melioribacteraceae | Melioribacter | Melioribacter sp. | |
| 27118519 | 27118519 | PRJNA890871_P_NODE_4162_length_743_cov_2.541791_g4028_i0 | PRJNA890871 | 4162 | 743 | 2.541791 | 18.88550713 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 233 | 1.06e-72 | NR | HED37266.1 | 2053306 | g4028 | i0 | 66.9 | 4.65545087483176 | 166 | 52 | 67 | 1 | 236 | 733 | 1 | 163 | HED37266.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase [Ignavibacteria bacterium] | diamond | 3459 | 233 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 27592812 | 27592812 | PRJNA890871_P_NODE_67964_length_249_cov_0.875000_g67829_i0 | PRJNA890871 | 67964 | 249 | 0.875 | 2.17875 | Ignavibacteriota bacterium | 2026749 | Bacteria | Bacteria | 92.4 | 2.98e-21 | NR | MBI3257902.1 | 2026749 | g67829 | i0 | 65.1 | 1.48192771084337 | 63 | 22 | 75.9 | 0 | 4 | 192 | 125 | 187 | MBI3257902.1 RNA polymerase sigma factor [Ignavibacteriota bacterium] | diamond | 369 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteriota bacterium | |||||
| 28350399 | 28350399 | PRJNA890871_P_NODE_85866_length_241_cov_0.916667_g85731_i0 | PRJNA890871 | 85866 | 241 | 0.916667 | 2.20916747 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 93.2 | 2.46e-20 | NR | MBK7987182.1 | 2053306 | g85731 | i0 | 53.8 | 1.94190871369295 | 78 | 36 | 97.1 | 0 | 241 | 8 | 105 | 182 | MBK7987182.1 glycosyltransferase family 9 protein [Ignavibacteria bacterium] | diamond | 468 | 93.2 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 28958372 | 28958372 | PRJNA890871_P_NODE_64548_length_250_cov_1.740113_g64413_i0 | PRJNA890871 | 64548 | 250 | 1.740113 | 4.3502825 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 119 | 3.51e-29 | NR | MBK7988491.1 | 2053306 | g64413 | i0 | 75.6 | 2.952 | 82 | 20 | 98.4 | 0 | 249 | 4 | 386 | 467 | MBK7988491.1 hypothetical protein [Ignavibacteria bacterium] | diamond | 738 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 29486864 | 29486864 | PRJNA890871_P_NODE_22750_length_346_cov_3.073260_g22615_i0 | PRJNA890871 | 22750 | 346 | 3.07326 | 10.6334796 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 52 | 6.62e-5 | NR | MFA5010493.1 | 2053306 | g22615 | i0 | 49 | 1.86416184971098 | 49 | 24 | 41.6 | 1 | 55 | 198 | 423 | 471 | MFA5010493.1 cysteine--tRNA ligase [Ignavibacteria bacterium] | diamond | 645 | 52 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 29589297 | 29589297 | PRJNA890871_P_NODE_63710_length_251_cov_0.865169_g63575_i0 | PRJNA890871 | 63710 | 251 | 0.865169 | 2.17157419 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.9 | 4.84e-6 | NR | MBK7986490.1 | 2053306 | g63575 | i0 | 36.6 | 2.9402390438247 | 82 | 49 | 96.8 | 2 | 251 | 9 | 1274 | 1353 | MBK7986490.1 choice-of-anchor D domain-containing protein [Ignavibacteria bacterium] | diamond | 738 | 53.9 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 30253165 | 30253165 | PRJNA890871_P_NODE_71412_length_247_cov_1.678161_g71277_i0 | PRJNA890871 | 71412 | 247 | 1.678161 | 4.14505767 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 108 | 2.05e-25 | NR | MBK7987883.1 | 2053306 | g71277 | i0 | 59.8 | 6.98380566801619 | 82 | 33 | 99.6 | 0 | 246 | 1 | 1545 | 1626 | MBK7987883.1 T9SS type A sorting domain-containing protein [Ignavibacteria bacterium] | diamond | 1725 | 109 | 0.990825688073395 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 30750742 | 30750742 | PRJNA890871_P_NODE_78134_length_244_cov_1.637427_g77999_i0 | PRJNA890871 | 78134 | 244 | 1.637427 | 3.99532188 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 115 | 6.28e-28 | NR | MBK7987386.1 | 2053306 | g77999 | i0 | 66.7 | 0.995901639344262 | 81 | 27 | 99.6 | 0 | 1 | 243 | 351 | 431 | MBK7987386.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Ignavibacteria bacterium] | diamond | 243 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 31256239 | 31256239 | PRJNA890871_P_NODE_92835_length_222_cov_4.308725_g92700_i0 | PRJNA890871 | 92835 | 222 | 4.308725 | 9.5653695 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 89.7 | 8.3e-19 | NR | MBP9097018.1 | 2053306 | g92700 | i0 | 54.8 | 2.97297297297297 | 73 | 33 | 98.6 | 0 | 1 | 219 | 45 | 117 | MBP9097018.1 primosomal protein N' [Ignavibacteria bacterium] | diamond | 660 | 89.7 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 31422192 | 31422192 | PRJNA890871_P_NODE_86016_length_241_cov_0.916667_g85881_i0 | PRJNA890871 | 86016 | 241 | 0.916667 | 2.20916747 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 115 | 9.72e-28 | NR | MBK7985455.1 | 2053306 | g85881 | i0 | 77.2 | 1.96680497925311 | 79 | 17 | 97.1 | 1 | 6 | 239 | 224 | 302 | MBK7985455.1 DUF4397 domain-containing protein [Ignavibacteria bacterium] | diamond | 474 | 116 | 0.991379310344828 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium | ||||
| 31952032 | 31952032 | PRJNA890871_P_NODE_4397_length_720_cov_4.089645_g4263_i0 | PRJNA890871 | 4397 | 720 | 4.089645 | 29.445444 | Ignavibacteria bacterium GWA2_35_8 | 1798417 | Bacteria | Bacteria | 65.9 | 2.05e-8 | NR | OGU17463.1 | 1798417 | g4263 | i0 | 53.7 | 1.80833333333333 | 54 | 25 | 22.5 | 0 | 589 | 428 | 361 | 414 | OGU17463.1 MAG: histidine--tRNA ligase [Ignavibacteria bacterium GWA2_35_8] | diamond | 1302 | 65.9 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium GWA2_35_8 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;