contig_metadata
13 rows where bioproject = "PRJNA890871" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4693480 | 4693480 | PRJNA890871_P_NODE_70284_length_248_cov_0.880000_g70149_i0 | PRJNA890871 | 70284 | 248 | 0.88 | 2.1824 | Leptotrichia sp. oral taxon 847 | 1785996 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|987458696|gb|CP014231.1| | 1785996 | g70149 | i0 | 98.79 | 7.85483870967742 | 248 | 3 | 100 | 0 | 1 | 248 | 933963 | 933716 | Leptotrichia sp. oral taxon 847 strain F0260 chromosome, complete genome | blastn | 1948 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 847 | ||
| 11067951 | 11067951 | PRJNA890871_P_NODE_40249_length_281_cov_3.663462_g40114_i0 | PRJNA890871 | 40249 | 281 | 3.663462 | 10.29432822 | Bacteria | 2 | Bacteria | Bacteria | 67.8 | 8.96e-11 | NR | WP_067139988.1 | 1769291 | g40114 | i0 | 46.7 | 3.75800711743772 | 90 | 39 | 96.1 | 1 | 276 | 7 | 362 | 442 | WP_067139988.1 DNA repair protein RecN [Oceanivirga salmonicida] | diamond | 1056 | 67.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Oceanivirga | Oceanivirga salmonicida | ||
| 15270271 | 15270271 | PRJNA890871_P_NODE_2572_length_1000_cov_4.993528_g2453_i0 | PRJNA890871 | 2572 | 1000 | 4.993528 | 49.93528 | Fusobacterium | 848 | Bacteria | Bacteria | 54.7 | 0.028 | NTclustered | gi|2705015041|gb|CP084068.1| | 856 | g2453 | i0 | 100 | 0.087 | 29 | 0 | 3 | 0 | 362 | 390 | 1799294 | 1799322 | Fusobacterium varium strain SB064 chromosome, complete genome | blastn | 87 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 16167658 | 16167658 | PRJNA890871_P_NODE_64433_length_250_cov_1.768362_g64298_i0 | PRJNA890871 | 64433 | 250 | 1.768362 | 4.420905 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 387 | 5.459999999999998e-103 | NTclustered | gi|1791353085|dbj|AP019829.2| | 157687 | g64298 | i0 | 96.186 | 13.14 | 236 | 9 | 94 | 0 | 1 | 236 | 2015573 | 2015338 | Leptotrichia wadei JCM16777 DNA, complete genome | blastn | 3285 | 387 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 21266685 | 21266685 | PRJNA890871_P_NODE_51897_length_264_cov_1.549738_g51762_i0 | PRJNA890871 | 51897 | 264 | 1.549738 | 4.0913083200000004 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|2666490969|gb|CP143322.1| | 188913 | g51762 | i0 | 100 | 0.106060606060606 | 28 | 0 | 11 | 0 | 169 | 196 | 4188 | 4215 | Cetobacterium somerae strain ceto plasmid p3, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 21267447 | 21267447 | PRJNA890871_P_NODE_93737_length_205_cov_4.128788_g93602_i0 | PRJNA890871 | 93737 | 205 | 4.128788 | 8.4640154 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 351 | 1.58e-92 | NTclustered | gi|1276712381|gb|CP024701.1| | 2663009 | g93602 | i0 | 97.561 | 1 | 205 | 5 | 100 | 0 | 1 | 205 | 160785 | 160581 | Fusobacterium pseudoperiodonticum strain KCOM 1277 chromosome, complete genome | blastn | 205 | 351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 21644814 | 21644814 | PRJNA890871_P_NODE_65677_length_250_cov_0.870056_g65542_i0 | PRJNA890871 | 65677 | 250 | 0.870056 | 2.17514 | root | 1 | Root_unresolved | Root_unresolved | 462 | 8.83e-126 | NTclustered | gi|2446175567|gb|CP117964.1| | 851 | g65542 | i0 | 100 | 50.384 | 250 | 0 | 100 | 0 | 1 | 250 | 2402229 | 2402478 | Fusobacterium nucleatum strain 2/1/50A chromosome, complete genome | blastn | 12596 | 462 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 26746479 | 26746479 | PRJNA890871_P_NODE_22021_length_351_cov_2.046763_g21886_i0 | PRJNA890871 | 22021 | 351 | 2.046763 | 7.18413813 | Sebaldella | 32068 | Bacteria | Bacteria | 82 | 1.65e-15 | NR | MBP9479416.1 | 2819260 | g21886 | i0 | 36.3 | 1.93162393162393 | 113 | 72 | 96.6 | 0 | 344 | 6 | 134 | 246 | MBP9479416.1 HlyD family secretion protein [Sebaldella sp.] | diamond | 678 | 82 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sebaldella | Sebaldella sp. | ||
| 28168814 | 28168814 | PRJNA890871_P_NODE_3425_length_826_cov_5.350598_g3296_i0 | PRJNA890871 | 3425 | 826 | 5.350598 | 44.19593948 | Fusobacterium | 848 | Bacteria | Bacteria | 131 | 2.9899999999999995e-31 | NR | WP_300331907.1 | 68766 | g3296 | i0 | 41 | 4.25665859564165 | 166 | 98 | 60.3 | 0 | 1 | 498 | 303 | 468 | WP_300331907.1 TolC family protein [Fusobacterium sp.] | diamond | 3516 | 131 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 28192320 | 28192320 | PRJNA890871_P_NODE_32266_length_302_cov_1.790393_g32131_i0 | PRJNA890871 | 32266 | 302 | 1.790393 | 5.40698686 | Sebaldella sp. | 2819260 | Bacteria | Bacteria | 47 | 0.00229 | NR | MBP9479416.1 | 2819260 | g32131 | i0 | 31.9 | 0.685430463576159 | 69 | 47 | 68.5 | 0 | 302 | 96 | 345 | 413 | MBP9479416.1 HlyD family secretion protein [Sebaldella sp.] | diamond | 207 | 47 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sebaldella | Sebaldella sp. | ||
| 28831747 | 28831747 | PRJNA890871_P_NODE_42248_length_278_cov_1.668293_g42113_i0 | PRJNA890871 | 42248 | 278 | 1.668293 | 4.63785454 | Bacteria | 2 | Bacteria | Bacteria | 65.1 | 7.65e-10 | NR | WP_304079183.1 | 157687 | g42113 | i0 | 30.2 | 6.0863309352518 | 86 | 60 | 92.8 | 0 | 20 | 277 | 144 | 229 | WP_304079183.1 S16 family serine protease [Leptotrichia wadei] | diamond | 1692 | 65.1 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 29360842 | 29360842 | PRJNA890871_P_NODE_2349_length_1065_cov_3.074597_g2233_i0 | PRJNA890871 | 2349 | 1065 | 3.074597 | 32.74445805 | Sebaldella sp. S | 2819260 | Bacteria | Bacteria | 112 | 1.3e-23 | NR | WP_253349086.1 | 2957809 | g2233 | i0 | 31.8 | 0.549295774647887 | 195 | 126 | 53 | 2 | 566 | 3 | 3 | 197 | WP_253349086.1 TolC family protein [Sebaldella sp. S0638] | diamond | 585 | 112 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sebaldella | Sebaldella sp. S0638 | ||
| 32142001 | 32142001 | PRJNA890871_P_NODE_18538_length_376_cov_2.445545_g18403_i0 | PRJNA890871 | 18538 | 376 | 2.445545 | 9.1952492 | Fusobacterium periodonticum | 860 | Bacteria | Bacteria | 44.3 | 0.0436 | NR | WP_008820496.1 | 860 | g18403 | i0 | 27.4 | 0.933510638297872 | 117 | 78 | 89.4 | 2 | 337 | 2 | 84 | 198 | WP_008820496.1 formylglycine-generating enzyme family protein [Fusobacterium periodonticum] | diamond | 351 | 44.3 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;