RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA890871", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA890871 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28508339 28508339 PRJNA890871_P_NODE_3307_length_844_cov_3.942931_g3181_i0 PRJNA890871 3307 844 3.942931 33.27833764 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 199 1.79e-58   NR MFC1745651.1 2053586 g3181 i0 42.3 6.20971563981043 284 154 98.1 5 14 841 5 286 MFC1745651.1 COG2958 family protein [Candidatus Rifleibacteriota bacterium] diamond 5241 199 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
28571386 28571386 PRJNA890871_P_NODE_52147_length_263_cov_3.810526_g52012_i0 PRJNA890871 52147 263 3.810526 10.02168338 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 76.3 7.69e-14   NR MEW6709795.1 2053586 g52012 i0 45.8 1.74524714828897 72 39 82.1 0 219 4 316 387 MEW6709795.1 (d)CMP kinase [Candidatus Rifleibacteriota bacterium] diamond 459 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;