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contig_metadata

22 rows where bioproject = "PRJNA889065", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 22 ✖

tax_phylum 1

  • Pisuviricota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA889065 · 22 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
863340 863340 PRJNA889065_S_NODE_201_length_1220_cov_14.244690_g161_i0 PRJNA889065 201 1220 14.24469 173.785218 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 54.7 0.035   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g161 i0 100 0.023770491803278702 29 0 2 0 1 29 57 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
4691843 4691843 PRJNA889065_S_NODE_764_length_845_cov_6.548628_g651_i0 PRJNA889065 764 845 6.548628 55.3359066 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 54.7 0.024   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g651 i0 100 0.0343195266272189 29 0 3 0 817 845 85 57 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
5966566 5966566 PRJNA889065_S_NODE_10925_length_290_cov_2.380567_g10687_i0 PRJNA889065 10925 290 2.380567 6.9036443 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10687 i0 100 0.196551724137931 29 0 10 0 262 290 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
5966685 5966685 PRJNA889065_S_NODE_3525_length_481_cov_52.052511_g3296_i0 PRJNA889065 3525 481 52.052511 250.37257791 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.013   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g3296 i0 100 0.118503118503119 29 0 6 0 453 481 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
5966691 5966691 PRJNA889065_S_NODE_3685_length_474_cov_4.742459_g3456_i0 PRJNA889065 3685 474 4.742459 22.47925566 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.013   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g3456 i0 100 0.120253164556962 29 0 6 0 446 474 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
8516169 8516169 PRJNA889065_S_NODE_10367_length_297_cov_2.649606_g10129_i0 PRJNA889065 10367 297 2.649606 7.86932982 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10129 i0 100 0.195286195286195 30 0 10 0 268 297 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
8516303 8516303 PRJNA889065_S_NODE_4487_length_438_cov_18.964557_g4251_i0 PRJNA889065 4487 438 18.964557 83.064759660000007 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.003   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g4251 i0 100 0.132420091324201 30 0 7 0 409 438 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
9791217 9791217 PRJNA889065_S_NODE_11208_length_286_cov_6.403292_g10970_i0 PRJNA889065 11208 286 6.403292 18.31341512 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10970 i0 100 0.199300699300699 29 0 10 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
9791344 9791344 PRJNA889065_S_NODE_4008_length_458_cov_17.486747_g3774_i0 PRJNA889065 4008 458 17.486747 80.08930126 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.003   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g3774 i0 100 0.126637554585153 30 0 7 0 1 30 13 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
13617025 13617025 PRJNA889065_S_NODE_23971_length_198_cov_4.167742_g23733_i0 PRJNA889065 23971 198 4.167742 8.25212916 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g23733 i0 100 0.287878787878788 29 0 15 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
13617087 13617087 PRJNA889065_S_NODE_5191_length_412_cov_7.113821_g4953_i0 PRJNA889065 5191 412 7.113821 29.30894252 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.011   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g4953 i0 100 0.138349514563107 29 0 7 0 384 412 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
14891287 14891287 PRJNA889065_S_NODE_13772_length_260_cov_9.341014_g13534_i0 PRJNA889065 13772 260 9.341014 24.2866364 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g13534 i0 100 0.223076923076923 30 0 12 0 231 260 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
17441474 17441474 PRJNA889065_S_NODE_1054_length_754_cov_11.876231_g910_i0 PRJNA889065 1054 754 11.876231 89.54678174 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.021   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g910 i0 100 0.0384615384615385 29 0 4 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
17441477 17441477 PRJNA889065_S_NODE_11134_length_287_cov_3.840164_g10896_i0 PRJNA889065 11134 287 3.840164 11.02127068 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.007   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10896 i0 96.97 0.212543554006969 33 0 11 1 255 287 44 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18714759 18714759 PRJNA889065_S_NODE_3435_length_485_cov_85.226244_g3206_i0 PRJNA889065 3435 485 85.226244 413.3472834 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.013   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g3206 i0 100 0.117525773195876 29 0 6 0 457 485 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18714798 18714798 PRJNA889065_S_NODE_815_length_827_cov_3.339286_g697_i0 PRJNA889065 815 827 3.339286 27.61589522 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g697 i0 100 0.0362756952841596 30 0 4 0 798 827 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 30 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
19990062 19990062 PRJNA889065_S_NODE_7056_length_356_cov_1.766773_g6818_i0 PRJNA889065 7056 356 1.766773 6.28971188 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.003   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g6818 i0 100 0.162921348314607 30 0 8 0 1 30 13 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22540091 22540091 PRJNA889065_S_NODE_10358_length_297_cov_2.952756_g10120_i0 PRJNA889065 10358 297 2.952756 8.76968532 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10120 i0 100 0.195286195286195 30 0 10 0 268 297 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22540103 22540103 PRJNA889065_S_NODE_12178_length_275_cov_32.866379_g11940_i0 PRJNA889065 12178 275 32.866379 90.38254225 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g11940 i0 100 0.210909090909091 30 0 11 0 1 30 13 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22540156 22540156 PRJNA889065_S_NODE_20718_length_214_cov_1.345029_g20480_i0 PRJNA889065 20718 214 1.345029 2.87836206 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g20480 i0 100 0.266355140186916 29 0 14 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22540192 22540192 PRJNA889065_S_NODE_2598_length_538_cov_40.703030_g2379_i0 PRJNA889065 2598 538 40.70303 218.9823014 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 60.2 3.16e-4   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g2379 i0 100 0.113382899628253 32 0 6 0 1 32 56 87 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 61 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
23815553 23815553 PRJNA889065_S_NODE_2779_length_526_cov_23.840580_g2556_i0 PRJNA889065 2779 526 23.84058 125.4014508 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.014   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g2556 i0 100 0.0551330798479087 29 0 6 0 498 526 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;