contig_metadata
11 rows where bioproject = "PRJNA889065" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9791232 | 9791232 | PRJNA889065_S_NODE_13108_length_266_cov_2.914798_g12870_i0 | PRJNA889065 | 13108 | 266 | 2.9147979999999998 | 7.75336268 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 5.99e-25 | NR | KAK1947371.1 | 4793 | g12870 | i0 | 77.8 | 7.10526315789474 | 63 | 14 | 71.1 | 0 | 265 | 77 | 123 | 185 | KAK1947371.1 60S ribosomal protein L23a [Phytophthora citrophthora] | diamond | 1890 | 103 | 0.990291262135922 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora citrophthora | ||
| 11445992 | 11445992 | PRJNA889065_S_NODE_23929_length_199_cov_1.179487_g23691_i0 | PRJNA889065 | 23929 | 199 | 1.179487 | 2.34717913 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 368 | 1.51e-97 | NTclustered | gi|1923460172|gb|MW187638.1| | 1125843 | g23691 | i0 | 100 | 101.015075376884 | 199 | 0 | 100 | 0 | 1 | 199 | 245 | 443 | Aphanomyces sinensis isolate CCRJB_22 small subunit ribosomal RNA gene, partial sequence; mitochondrial | blastn | 20102 | 368 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces sinensis | ||
| 19093661 | 19093661 | PRJNA889065_S_NODE_175_length_1291_cov_5.836538_g137_i0 | PRJNA889065 | 175 | 1291 | 5.836538 | 75.34970558 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 211 | 2.06e-49 | NTclustered | gi|937408816|ref|NC_027966.1| | 114742 | g137 | i0 | 79.739 | 25.5267234701782 | 306 | 51 | 23 | 10 | 799 | 1098 | 10097 | 9797 | Pythium insidiosum mitochondrial DNA, complete genome | blastn | 32955 | 213 | 0.990610328638498 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 26651599 | 26651599 | PRJNA889065_S_NODE_15781_length_244_cov_3.631841_g15543_i0 | PRJNA889065 | 15781 | 244 | 3.631841 | 8.86169204 | Viridiplantae | 33090 | SAR_Eukaryotes | SAR_Eukaryotes | 97.8 | 3.11e-22 | NR | KAG9404282.1 | 112091 | g15543 | i0 | 69.7 | 2.4344262295082 | 66 | 20 | 81.1 | 0 | 243 | 46 | 258 | 323 | KAG9404282.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Aphanomyces cochlioides] | diamond | 594 | 97.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 26865955 | 26865955 | PRJNA889065_S_NODE_6041_length_383_cov_6.747059_g5803_i0 | PRJNA889065 | 6041 | 383 | 6.747059 | 25.84123597 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 68.9 | 8.89e-11 | NR | RHY25281.1 | 112090 | g5803 | i0 | 50.8 | 4.06527415143603 | 61 | 28 | 46.2 | 1 | 1 | 177 | 260 | 320 | RHY25281.1 hypothetical protein DYB25_005061 [Aphanomyces astaci] | diamond | 1557 | 68.9 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 27118464 | 27118464 | PRJNA889065_S_NODE_23782_length_199_cov_2.653846_g23544_i0 | PRJNA889065 | 23782 | 199 | 2.653846 | 5.28115354 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 53.1 | 4.19e-6 | NR | KAF4038965.1 | 4787 | g23544 | i0 | 51.9 | 0.814070351758794 | 54 | 25 | 79.9 | 1 | 41 | 199 | 108 | 161 | KAF4038965.1 DNA/RNA non-specific endonuclease [Phytophthora infestans] | diamond | 162 | 53.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 28073977 | 28073977 | PRJNA889065_S_NODE_26905_length_187_cov_1.451389_g26667_i0 | PRJNA889065 | 26905 | 187 | 1.451389 | 2.71409743 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 55.1 | 7.97e-7 | NR | CCI10304.1 | 65357 | g26667 | i0 | 51.9 | 2.48663101604278 | 52 | 25 | 83.4 | 0 | 157 | 2 | 555 | 606 | CCI10304.1 unnamed protein product [Albugo candida] | diamond | 465 | 55.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 29052998 | 29052998 | PRJNA889065_S_NODE_10208_length_299_cov_4.472656_g9970_i0 | PRJNA889065 | 10208 | 299 | 4.472656 | 13.37324144 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 106 | 3.28e-24 | NR | TMW65930.1 | 41045 | g9970 | i0 | 48.9 | 11.3177257525084 | 94 | 48 | 94.3 | 0 | 297 | 16 | 228 | 321 | TMW65930.1 hypothetical protein Poli38472_003695 [Pythium oligandrum] | diamond | 3384 | 106 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 29116159 | 29116159 | PRJNA889065_S_NODE_24468_length_196_cov_2.921569_g24230_i0 | PRJNA889065 | 24468 | 196 | 2.921569 | 5.72627524 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 80.1 | 1.24e-16 | NR | XP_024584861.1 | 4781 | g24230 | i0 | 73.3 | 10.3010204081633 | 45 | 12 | 68.9 | 0 | 1 | 135 | 137 | 181 | XP_024584861.1 adp-ribosylation factor [Plasmopara halstedii] | diamond | 2019 | 80.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Plasmopara | Plasmopara halstedii | ||
| 31066775 | 31066775 | PRJNA889065_S_NODE_27355_length_185_cov_1.943662_g27117_i0 | PRJNA889065 | 27355 | 185 | 1.943662 | 3.5957747 | Saprolegnia diclina VS2 | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 68.2 | 1.84e-11 | NR | XP_008615048.1 | 1156394 | g27117 | i0 | 79.5 | 1.23243243243243 | 39 | 8 | 63.2 | 0 | 7 | 123 | 623 | 661 | XP_008615048.1 hypothetical protein SDRG_10814 [Saprolegnia diclina VS20] | diamond | 228 | 68.2 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 31612033 | 31612033 | PRJNA889065_S_NODE_33256_length_166_cov_1.731707_g33018_i0 | PRJNA889065 | 33256 | 166 | 1.731707 | 2.87463362 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 94.7 | 3.17e-21 | NR | KAF0714835.1 | 120398 | g33018 | i0 | 86.5 | 5.63855421686747 | 52 | 7 | 94 | 0 | 1 | 156 | 343 | 394 | KAF0714835.1 hypothetical protein As57867_003645 [Aphanomyces stellatus] | diamond | 936 | 95.5 | 0.991623036649215 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;