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contig_metadata

12 rows where bioproject = "PRJNA889065" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA889065 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
863317 863317 PRJNA889065_S_NODE_15481_length_247_cov_1.352941_g15243_i0 PRJNA889065 15481 247 1.352941 3.34176427 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 457 4.05e-124   NTclustered gi|238617602|gb|FJ973377.1| 188950 g15243 i0 100 34.1052631578947 247 0 100 0 1 247 344 590 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8424 457 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2138780 2138780 PRJNA889065_S_NODE_18782_length_224_cov_28.861878_g18544_i0 PRJNA889065 18782 224 28.861878 64.65060672 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 414 2.1999999999999996e-111   NTclustered gi|238617602|gb|FJ973377.1| 188950 g18544 i0 100 57.2723214285714 224 0 100 0 1 224 2911 2688 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 12829 414 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2517804 2517804 PRJNA889065_S_NODE_5182_length_412_cov_15.021680_g4944_i0 PRJNA889065 5182 412 15.02168 61.8893216 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 754 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g4944 i0 99.757 100.507281553398 412 0 100 1 1 412 1031 621 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 41409 754 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4691687 4691687 PRJNA889065_S_NODE_11524_length_283_cov_2.333333_g11286_i0 PRJNA889065 11524 283 2.333333 6.60333239 Cercomonas agilis 310805 SAR_Eukaryotes SAR_Eukaryotes 207 5.27e-49   NTclustered gi|58414956|gb|AY748813.1| 310805 g11286 i0 86.316 93.4310954063604 190 26 67 0 1 190 39 228 Cercomonas agilis polyubiquitin (UBQ) gene, partial cds blastn 26441 207 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas agilis
7241501 7241501 PRJNA889065_S_NODE_31266_length_172_cov_1.426357_g31028_i0 PRJNA889065 31266 172 1.426357 2.45333404 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 318 1.2899999999999999e-82   NTclustered gi|238617602|gb|FJ973377.1| 188950 g31028 i0 100 100.901162790698 172 0 100 0 1 172 1323 1152 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 17355 318 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9791267 9791267 PRJNA889065_S_NODE_21968_length_207_cov_4.176829_g21730_i0 PRJNA889065 21968 207 4.176829 8.64603603 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 350 5.74e-92   NTclustered gi|88792583|gb|DQ386164.1| 372086 g21730 i0 97.101 29 207 6 100 0 1 207 1988 2194 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 6003 350 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
12342532 12342532 PRJNA889065_S_NODE_4110_length_454_cov_6.944039_g3876_i0 PRJNA889065 4110 454 6.944039 31.52593706 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 826 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3876 i0 99.778 68.4030837004405 450 1 99 0 1 450 1665 2114 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 31055 826 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14891412 14891412 PRJNA889065_S_NODE_5732_length_393_cov_13.225714_g5494_i0 PRJNA889065 5732 393 13.225714 51.97705602 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 568 3.02e-157   NTclustered gi|224996436|gb|FJ654268.1| 188950 g5494 i0 97.329 33.0712468193384 337 4 85 2 61 393 2 337 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12997 568 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16166028 16166028 PRJNA889065_S_NODE_14493_length_254_cov_11.014218_g14255_i0 PRJNA889065 14493 254 11.014218 27.97611372 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 470 5.37e-128   NTclustered gi|238617602|gb|FJ973377.1| 188950 g14255 i0 100 31.3582677165354 254 0 100 0 1 254 2410 2157 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 7965 470 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16166144 16166144 PRJNA889065_S_NODE_5653_length_396_cov_3.861190_g5415_i0 PRJNA889065 5653 396 3.86119 15.2903124 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 320 9.41e-83   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g5415 i0 82.642 52.780303030303 386 43 97 16 14 396 4039 3675 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20901 320 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19989950 19989950 PRJNA889065_S_NODE_17776_length_230_cov_5.631016_g17538_i0 PRJNA889065 17776 230 5.631016 12.9513368 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 425 1.05e-114   NTclustered gi|33309639|gb|AF411276.1| 188950 g17538 i0 100 83.3 230 0 100 0 1 230 1687 1458 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 19159 425 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21644366 21644366 PRJNA889065_S_NODE_28937_length_179_cov_3.463235_g28699_i0 PRJNA889065 28937 179 3.463235 6.19919065 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 331 1.74e-86   NTclustered gi|33309627|gb|AF411270.1| 100933 g28699 i0 100 99.9888268156425 179 0 100 0 1 179 1619 1441 Cercomonas longicauda 18S ribosomal RNA gene, complete sequence blastn 17898 331 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas longicauda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;