RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA889065", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA889065 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15270087 15270087 PRJNA889065_S_NODE_17512_length_232_cov_3.111111_g17274_i0 PRJNA889065 17512 232 3.111111 7.21777752 Rozella allomycis CSF55 988480 Fungi Fungi 72.8 2.83e-13   NR EPZ34692.1 988480 g17274 i0 62.7 3.67241379310345 59 21 75 1 174 1 190 248 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 852 72.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28287022 28287022 PRJNA889065_S_NODE_16406_length_240_cov_1.548223_g16168_i0 PRJNA889065 16406 240 1.548223 3.7157352 Rozella allomycis CSF55 988480 Fungi Fungi 53.9 4.02e-6   NR EPZ31898.1 988480 g16168 i0 74.2 2.575 31 8 38.8 0 190 98 36 66 EPZ31898.1 ABC transporter E family member 2 [Rozella allomycis CSF55] diamond 618 53.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;