RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA889065", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA889065 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26834103 26834103 PRJNA889065_S_NODE_6021_length_384_cov_3.017595_g5783_i0 PRJNA889065 6021 384 3.017595 11.587564800000001 Paraphysoderma sedebokerense 1500003 Fungi Fungi 89.4 6.3e-18   NR KAI9142317.1 1500003 g5783 i0 42.6 3.7265625 122 62 93 3 3 359 318 434 KAI9142317.1 peptide chain release factor eRF1/aRF1 [Paraphysoderma sedebokerense] diamond 1431 89.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29707620 29707620 PRJNA889065_S_NODE_38470_length_153_cov_1.672727_g38232_i0 PRJNA889065 38470 153 1.672727 2.55927231 Coelomomyces lativittatus 945690 Fungi Fungi 42 0.018   NR KAJ1498817.1 945690 g38232 i0 49 7.23529411764706 51 25 98 1 150 1 128 178 KAJ1498817.1 40S ribosomal protein, partial [Coelomomyces lativittatus] diamond 1107 42 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
31011173 31011173 PRJNA889065_S_NODE_28274_length_182_cov_1.323741_g28036_i0 PRJNA889065 28274 182 1.323741 2.40920862 Opisthokonta 33154 Fungi Fungi 51.2 1.68e-5   NR KAJ3372820.1 64504 g28036 i0 52.1 9.24725274725275 48 23 79.1 0 4 147 212 259 KAJ3372820.1 hypothetical protein GGF31_001357 [Allomyces arbusculus] diamond 1683 51.6 0.992248062015504 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
31129406 31129406 PRJNA889065_S_NODE_21595_length_209_cov_2.819277_g21357_i0 PRJNA889065 21595 209 2.819277 5.89228893 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 63.5 1.08e-9   NR KNE65038.1 578462 g21357 i0 69.4 1.57894736842105 36 11 51.7 0 109 2 117 152 KNE65038.1 methionine aminopeptidase, type II [Allomyces macrogynus ATCC 38327] diamond 330 63.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;