RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA889065", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA889065 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26960389 26960389 PRJNA889065_S_NODE_18882_length_224_cov_2.005525_g18644_i0 PRJNA889065 18882 224 2.005525 4.492376 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.0274   NR HEY8691151.1 2026724 g18644 i0 45.2 0.5625 42 23 56.3 0 82 207 93 134 HEY8691151.1 TQO small subunit DoxD [Chloroflexota bacterium] diamond 126 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28350341 28350341 PRJNA889065_S_NODE_3926_length_462_cov_3.300716_g3693_i0 PRJNA889065 3926 462 3.300716 15.24930792 Anaerolineae bacterium 2052143 Bacteria Bacteria 56.6 3.16e-6   NR HSH02636.1 2052143 g3693 i0 28.9 1.67532467532468 135 80 87.7 4 3 407 139 257 HSH02636.1 RNA methyltransferase [Anaerolineae bacterium] diamond 774 56.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29305374 29305374 PRJNA889065_S_NODE_209_length_1206_cov_8.442820_g168_i0 PRJNA889065 209 1206 8.44282 101.8204092 root 1 Root_unresolved Root_unresolved 60.1 7.76e-6   NR MBF6605052.1 2026724 g168 i0 44.6 1.53980099502488 74 39 17.9 1 643 858 178 251 MBF6605052.1 cytochrome c oxidase subunit II [Chloroflexota bacterium] diamond 1857 60.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31003423 31003423 PRJNA889065_S_NODE_4454_length_440_cov_2.261965_g4220_i0 PRJNA889065 4454 440 2.261965 9.952646 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 98.2 6.02e-21   NR UCE97820.1 2026734 g4220 i0 35.5 4.90909090909091 152 90 99.5 2 3 440 59 208 UCE97820.1 MAG: molybdopterin molybdotransferase MoeA [Dehalococcoidia bacterium] diamond 2160 98.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31382815 31382815 PRJNA889065_S_NODE_4136_length_453_cov_2.468293_g3902_i0 PRJNA889065 4136 453 2.468293 11.18136729 Chloroflexota bacterium 2026724 Bacteria Bacteria 81.3 2.58e-15   NR MFC2031807.1 2026724 g3902 i0 44.3 1.90066225165563 88 47 57 1 178 435 62 149 MFC2031807.1 fumarylacetoacetate hydrolase family protein [Chloroflexota bacterium] diamond 861 81.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;