RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA889065", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA889065 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26643836 26643836 PRJNA889065_S_NODE_26841_length_187_cov_1.916667_g26603_i0 PRJNA889065 26841 187 1.916667 3.58416729 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 48.5 1.6e-4   NR KAF4669884.1 330153 g26603 i0 39.6 0.770053475935829 48 29 77 0 2 145 57 104 KAF4669884.1 hypothetical protein FOL47_002315 [Perkinsus chesapeaki] diamond 144 48.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
26999901 26999901 PRJNA889065_S_NODE_20122_length_217_cov_1.586207_g19884_i0 PRJNA889065 20122 217 1.586207 3.44206919 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 59.7 2.77e-8   NR KAF4711357.1 32597 g19884 i0 50 4.31336405529954 52 26 71.9 0 1 156 306 357 KAF4711357.1 hypothetical protein FOZ63_028272, partial [Perkinsus olseni] diamond 936 60.1 0.993344425956739 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27813869 27813869 PRJNA889065_S_NODE_18644_length_225_cov_2.780220_g18406_i0 PRJNA889065 18644 225 2.78022 6.255495 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00602   NR KAF4726789.1 32597 g18406 i0 39.3 0.813333333333333 61 34 78.7 2 190 14 177 236 KAF4726789.1 hypothetical protein FOZ63_029957, partial [Perkinsus olseni] diamond 183 44.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32844450 32844450 PRJNA889065_S_NODE_18180_length_228_cov_1.740541_g17942_i0 PRJNA889065 18180 228 1.740541 3.96843348 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.23e-8   NR KAF4657269.1 330153 g17942 i0 52.2 3.63157894736842 46 22 60.5 0 63 200 455 500 KAF4657269.1 hypothetical protein FOL47_008531 [Perkinsus chesapeaki] diamond 828 60.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;