RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA889065", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA889065 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5966721 5966721 PRJNA889065_S_NODE_705_length_864_cov_23.800244_g598_i0 PRJNA889065 705 864 23.800244 205.63410816 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 143 5.0199999999999993e-29   NTclustered gi|2794954618|ref|XM_067872953.1| 2049356 g598 i0 84.722 17.5451388888889 144 20 17 2 667 809 1097 1239 Monocercomonoides exilis conventional actin (MONOS_2989), mRNA blastn 15159 143 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19990055 19990055 PRJNA889065_S_NODE_6116_length_381_cov_2.035503_g5878_i0 PRJNA889065 6116 381 2.035503 7.75526643 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.003   NTclustered gi|2794957502|ref|XM_067874388.1| 2049356 g5878 i0 100 0.078740157480315 30 0 8 0 324 353 3422 3393 Monocercomonoides exilis uncharacterized protein (MONOS_4325), partial mRNA blastn 30 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31485669 31485669 PRJNA889065_S_NODE_15136_length_249_cov_2.456311_g14898_i0 PRJNA889065 15136 249 2.456311 6.11621439 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 9.92e-13   NR KAA6377708.1 222440 g14898 i0 51.6 1.5421686746988 64 30 75.9 1 31 219 118 181 KAA6377708.1 MAG: putative Serine/threonine-protein kinase pakC [Streblomastix strix] diamond 384 70.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;