RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA889065", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA889065 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28697891 28697891 PRJNA889065_S_NODE_8607_length_324_cov_3.729537_g8369_i0 PRJNA889065 8607 324 3.729537 12.08369988 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 51.2 9.79e-5   NR GKT34421.1 2918883 g8369 i0 39.1 1.12037037037037 64 34 55.6 2 322 143 100 162 GKT34421.1 Small GTPase like protein [Aduncisulcus paluster] diamond 363 51.2 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
31635667 31635667 PRJNA889065_S_NODE_35836_length_159_cov_2.379310_g35598_i0 PRJNA889065 35836 159 2.37931 3.7831029 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 53.5 1.76e-6   NR KAG9395724.1 201153 g35598 i0 44 3.71698113207547 50 28 94.3 0 3 152 70 119 KAG9395724.1 Brix domain [Carpediemonas membranifera] diamond 591 53.5 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32844451 32844451 PRJNA889065_S_NODE_21200_length_211_cov_2.898810_g20962_i0 PRJNA889065 21200 211 2.89881 6.1164891 root 1 Root_unresolved Root_unresolved 41.6 0.0403   NR ESU43409.1 5741 g20962 i0 38.1 1.50710900473934 63 34 83.9 3 183 7 73 134 ESU43409.1 Hypothetical protein GSB_153417, partial [Giardia intestinalis] diamond 318 42 0.990476190476191 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;